Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNU1-95P-201ENST00000516357 160 ntBASIC1.82□□□□□ -2.12
RPS28P62857 RNU1-128P-201ENST00000516704 160 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC1.82□□□□□ -2.12
RPS28P62857 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RPS28P62857 CYCSP29-201ENST00000533731 318 ntBASIC1.82□□□□□ -2.12
RPS28P62857 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RPS28P62857 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC1.82□□□□□ -2.12
RPS28P62857 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC1.82□□□□□ -2.12
RPS28P62857 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RPS28P62857 STARD6-204ENST00000584040 660 ntTSL 3 BASIC1.82□□□□□ -2.12
RPS28P62857 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC1.82□□□□□ -2.12
RPS28P62857 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.82□□□□□ -2.12
RPS28P62857 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC1.82□□□□□ -2.12
RPS28P62857 AC002487.1-201ENST00000604565 994 ntBASIC1.82□□□□□ -2.12
RPS28P62857 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC1.82□□□□□ -2.12
RPS28P62857 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.82□□□□□ -2.12
RPS28P62857 AC099676.1-201ENST00000608886 657 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AL137847.3-201ENST00000611521 109 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AL020991.1-201ENST00000612314 373 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AC004477.3-201ENST00000614061 590 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AL591926.1-201ENST00000620542 217 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AL121985.3-201ENST00000620690 523 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AC073308.1-201ENST00000623696 305 ntBASIC1.82□□□□□ -2.12
RPS28P62857 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPS28P62857 AL357140.4-201ENST00000636827 412 ntBASIC1.82□□□□□ -2.12
RPS28P62857 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RPS28P62857 AC046144.1-201ENST00000478559 1853 ntBASIC1.82□□□□□ -2.12
RPS28P62857 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RPS28P62857 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
RPS28P62857 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RPS28P62857 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
RPS28P62857 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RPS28P62857 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.81□□□□□ -2.12
RPS28P62857 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
RPS28P62857 RNU6-301P-201ENST00000384277 107 ntBASIC1.81□□□□□ -2.12
RPS28P62857 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
RPS28P62857 MIR298-201ENST00000401212 88 ntBASIC1.81□□□□□ -2.12
RPS28P62857 HMGB1P20-201ENST00000402555 677 ntBASIC1.81□□□□□ -2.12
RPS28P62857 U3.37-201ENST00000408528 213 ntBASIC1.81□□□□□ -2.12
RPS28P62857 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.81□□□□□ -2.12
RPS28P62857 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC1.81□□□□□ -2.12
RPS28P62857 EEF1B2P8-201ENST00000414101 671 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.81□□□□□ -2.12
RPS28P62857 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC1.81□□□□□ -2.12
RPS28P62857 AL035660.1-201ENST00000422041 222 ntBASIC1.81□□□□□ -2.12
RPS28P62857 RPL27AP8-201ENST00000424277 446 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC1.81□□□□□ -2.12
RPS28P62857 MTCO1P39-201ENST00000426148 480 ntBASIC1.81□□□□□ -2.12
RPS28P62857 OR6C71P-201ENST00000432580 913 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC1.81□□□□□ -2.12
RPS28P62857 ATP6V1E1P1-201ENST00000439215 681 ntBASIC1.81□□□□□ -2.12
RPS28P62857 CEACAMP9-201ENST00000442990 513 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC1.81□□□□□ -2.12
RPS28P62857 MORF4L1P4-201ENST00000450245 976 ntBASIC1.81□□□□□ -2.12
RPS28P62857 TRGVB-201ENST00000453257 471 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AC008280.2-201ENST00000455473 307 ntBASIC1.81□□□□□ -2.12
RPS28P62857 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.81□□□□□ -2.12
RPS28P62857 ANKRD26P4-201ENST00000455755 950 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.81□□□□□ -2.12
RPS28P62857 RPL21P41-201ENST00000459863 264 ntBASIC1.81□□□□□ -2.12
RPS28P62857 RPS12P20-201ENST00000464109 380 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AC073648.3-201ENST00000504939 925 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AL158068.1-201ENST00000506116 616 ntBASIC1.81□□□□□ -2.12
RPS28P62857 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.81□□□□□ -2.12
RPS28P62857 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.81□□□□□ -2.12
RPS28P62857 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.81□□□□□ -2.12
RPS28P62857 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC1.81□□□□□ -2.12
RPS28P62857 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RPS28P62857 PAICSP4-201ENST00000517543 1253 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AC087369.1-201ENST00000520775 996 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RPS28P62857 AP000827.1-201ENST00000527814 258 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AC118942.1-201ENST00000529674 1035 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AL355836.1-201ENST00000555951 870 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AL049872.1-201ENST00000556323 322 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
RPS28P62857 AC022655.2-201ENST00000577280 318 ntBASIC1.81□□□□□ -2.12
RPS28P62857 RN7SL230P-201ENST00000580835 303 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC1.81□□□□□ -2.12
RPS28P62857 AC093227.2-201ENST00000589357 285 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AL353748.2-201ENST00000622148 471 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AC011944.2-201ENST00000624440 683 ntBASIC1.81□□□□□ -2.12
RPS28P62857 AC009039.2-201ENST00000624524 529 ntBASIC1.81□□□□□ -2.12
RPS28P62857 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.81□□□□□ -2.12
RPS28P62857 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC1.81□□□□□ -2.12
RPS28P62857 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC1.81□□□□□ -2.12
RPS28P62857 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC1.81□□□□□ -2.12
RPS28P62857 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPS28P62857 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
RPS28P62857 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPS28P62857 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RPS28P62857 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RPS28P62857 RNA5SP273-201ENST00000362484 113 ntBASIC1.8□□□□□ -2.12
RPS28P62857 RN7SKP162-201ENST00000363605 345 ntBASIC1.8□□□□□ -2.12
RPS28P62857 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPS28P62857 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RPS28P62857 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RPS28P62857 RNU6-444P-201ENST00000383988 108 ntBASIC1.8□□□□□ -2.12
RPS28P62857 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms