Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNU6-1322P-201ENST00000364309 107 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 RNY4P16-201ENST00000364768 94 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 Y_RNA.381-201ENST00000365666 102 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AL356776.1-201ENST00000406574 447 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 SNORA77-201ENST00000408716 125 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 RN7SKP235-201ENST00000410662 305 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.47□□□□□ -1.69
CLRN1P58418 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 MTATP6P18-201ENST00000417994 673 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 RPS15AP40-201ENST00000419621 391 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AC245054.1-201ENST00000420944 258 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AL355433.1-201ENST00000422804 300 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.47□□□□□ -1.69
CLRN1P58418 HMGN2P27-201ENST00000427352 270 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AC006548.1-201ENST00000427470 102 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.47□□□□□ -1.69
CLRN1P58418 USP9YP9-201ENST00000429406 715 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 BX323845.1-201ENST00000432417 179 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AC098614.3-201ENST00000438957 440 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AC127537.2-201ENST00000439258 465 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.47□□□□□ -1.69
CLRN1P58418 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.47□□□□□ -1.69
CLRN1P58418 AC092647.2-201ENST00000452998 253 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 RPL23AP72-201ENST00000492447 435 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.47□□□□□ -1.69
CLRN1P58418 SNRPCP2-201ENST00000504370 475 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AC018710.1-201ENST00000506509 158 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.47□□□□□ -1.69
CLRN1P58418 AF235103.2-201ENST00000525753 346 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.47□□□□□ -1.69
CLRN1P58418 AC022832.1-201ENST00000530718 645 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.47□□□□□ -1.69
CLRN1P58418 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLRN1P58418 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.47□□□□□ -1.69
CLRN1P58418 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.47□□□□□ -1.69
CLRN1P58418 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.47□□□□□ -1.69
CLRN1P58418 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.47□□□□□ -1.69
CLRN1P58418 UBE2L4-201ENST00000587688 464 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.47□□□□□ -1.69
CLRN1P58418 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.47□□□□□ -1.69
CLRN1P58418 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.47□□□□□ -1.69
CLRN1P58418 AL162413.1-201ENST00000603198 110 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 C8orf59P2-201ENST00000603441 271 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AC113194.1-201ENST00000606037 500 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AL049794.2-201ENST00000616301 365 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AC019206.1-201ENST00000621938 425 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AL158801.5-201ENST00000623123 465 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 CR381572.1-201ENST00000625098 102 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 FER-210ENST00000628534 558 ntTSL 5 BASIC4.47□□□□□ -1.69
CLRN1P58418 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.47□□□□□ -1.69
CLRN1P58418 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.47□□□□□ -1.69
CLRN1P58418 SAMMSON-227ENST00000642114 1199 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLRN1P58418 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 LINC00622-201ENST00000562811 1570 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 AC100778.3-201ENST00000580060 1750 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLRN1P58418 AC007529.1-201ENST00000418574 2178 ntBASIC4.47□□□□□ -1.69
CLRN1P58418 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLRN1P58418 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CLRN1P58418 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLRN1P58418 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CLRN1P58418 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLRN1P58418 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CLRN1P58418 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLRN1P58418 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLRN1P58418 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLRN1P58418 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLRN1P58418 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLRN1P58418 PHKBP1-201ENST00000450951 1951 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLRN1P58418 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CLRN1P58418 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.46□□□□□ -1.7
CLRN1P58418 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLRN1P58418 AC131971.1-201ENST00000332881 1482 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 NMD3P1-201ENST00000439704 1488 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 SNORA73.1-201ENST00000363107 205 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 RNU1-39P-201ENST00000383897 165 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AC068050.1-201ENST00000394891 380 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLRN1P58418 AL049697.2-201ENST00000403708 294 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 U3.36-201ENST00000408418 213 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 RNU6-908P-201ENST00000410160 94 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.46□□□□□ -1.7
CLRN1P58418 OR51A5P-201ENST00000415429 942 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.46□□□□□ -1.7
CLRN1P58418 AC092832.1-201ENST00000422934 400 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.46□□□□□ -1.7
CLRN1P58418 MTND4LP16-201ENST00000440828 295 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AC114495.1-201ENST00000441274 436 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.46□□□□□ -1.7
CLRN1P58418 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.46□□□□□ -1.7
CLRN1P58418 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.46□□□□□ -1.7
CLRN1P58418 KNOP1P3-201ENST00000446933 426 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AC002553.2-201ENST00000453217 340 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AL691482.1-201ENST00000453255 87 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 RAD23BP3-201ENST00000454157 1152 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 RPS20P21-201ENST00000466859 343 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 RN7SL222P-201ENST00000476452 299 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms