Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HMGCS2P54868 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGCS2P54868 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCS2P54868 AL356968.1-201ENST00000416622 474 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.74□□□□□ -1.81
HMGCS2P54868 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCS2P54868 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGCS2P54868 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCS2P54868 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCS2P54868 AC000041.1-201ENST00000439655 175 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGCS2P54868 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.74□□□□□ -1.81
HMGCS2P54868 RPS4XP2-201ENST00000458402 793 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 FCF1P3-201ENST00000496394 590 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGCS2P54868 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.74□□□□□ -1.81
HMGCS2P54868 AP002404.1-201ENST00000532005 451 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AC135001.1-201ENST00000544546 283 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AC025260.1-201ENST00000548858 430 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGCS2P54868 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.74□□□□□ -1.81
HMGCS2P54868 MTND4LP24-201ENST00000572277 291 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGCS2P54868 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGCS2P54868 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGCS2P54868 AC245884.10-201ENST00000597355 337 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AL139286.1-201ENST00000604465 483 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AC010680.4-201ENST00000605334 543 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AC124016.2-201ENST00000610058 665 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AC100793.4-201ENST00000613683 429 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 U6.48-201ENST00000618523 106 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AL512427.1-201ENST00000618593 349 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AC073569.3-201ENST00000619055 682 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 SNORD39.4-201ENST00000620099 78 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AP003476.1-201ENST00000623984 516 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 AC010608.3-201ENST00000625048 527 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 U6.107-201ENST00000637108 79 ntBASIC3.74□□□□□ -1.81
HMGCS2P54868 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGCS2P54868 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGCS2P54868 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCS2P54868 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HMGCS2P54868 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HMGCS2P54868 OR5BR1P-201ENST00000524992 1330 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCS2P54868 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HMGCS2P54868 RNU5B-4P-201ENST00000363508 111 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 RNA5SP27-201ENST00000363839 119 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.73□□□□□ -1.81
HMGCS2P54868 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS2P54868 SNORA7.4-201ENST00000384249 137 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 MIR124-3-201ENST00000384866 87 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 AL136116.1-201ENST00000403591 381 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCS2P54868 RNA5SP229-201ENST00000410809 99 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 RPS12P23-201ENST00000419579 400 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS2P54868 ELOCP6-201ENST00000429066 328 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCS2P54868 AC092685.1-201ENST00000447960 1243 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS2P54868 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCS2P54868 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS2P54868 GTF2IP12-201ENST00000456547 356 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 ELOCP12-201ENST00000458706 328 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 AC104982.1-201ENST00000478775 574 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 AC012170.1-201ENST00000495139 359 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS2P54868 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS2P54868 IGKV2-36-201ENST00000519999 223 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS2P54868 PSMA2P1-201ENST00000526365 646 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS2P54868 YWHAZP1-201ENST00000556286 722 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.73□□□□□ -1.81
HMGCS2P54868 MIR7106-201ENST00000612419 65 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 uc_338.32-201ENST00000615087 172 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 MIR4727-201ENST00000622232 55 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 AL445984.1-201ENST00000637834 659 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 AC006927.2-201ENST00000639256 389 ntBASIC3.73□□□□□ -1.81
HMGCS2P54868 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.73□□□□□ -1.81
HMGCS2P54868 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCS2P54868 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCS2P54868 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCS2P54868 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGCS2P54868 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGCS2P54868 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS2P54868 AC017071.1-201ENST00000564407 2204 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
HMGCS2P54868 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS2P54868 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HMGCS2P54868 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS2P54868 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HMGCS2P54868 RNU6-7-201ENST00000364784 107 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 RNU6-8-201ENST00000365467 107 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 RNU1-89P-201ENST00000384592 164 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 AC234782.4-201ENST00000417646 1048 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 AC012065.2-201ENST00000421295 375 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 AC093422.3-201ENST00000428506 305 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms