Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
COL1A1P02452 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.25□□□□□ -1.89
COL1A1P02452 MIR26A1-201ENST00000362205 77 ntBASIC3.25□□□□□ -1.89
COL1A1P02452 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL1A1P02452 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.25□□□□□ -1.89
COL1A1P02452 AC022431.1-201ENST00000450941 438 ntBASIC3.25□□□□□ -1.89
COL1A1P02452 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.25□□□□□ -1.89
COL1A1P02452 AC096725.1-201ENST00000514266 313 ntBASIC3.25□□□□□ -1.89
COL1A1P02452 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.25□□□□□ -1.89
COL1A1P02452 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.25□□□□□ -1.89
COL1A1P02452 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.25□□□□□ -1.89
COL1A1P02452 AP003102.1-201ENST00000525638 661 ntBASIC3.25□□□□□ -1.89
COL1A1P02452 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL1A1P02452 AP002812.4-201ENST00000532139 286 ntBASIC3.25□□□□□ -1.89
COL1A1P02452 HPRT1P3-201ENST00000539521 576 ntBASIC3.25□□□□□ -1.89
COL1A1P02452 AC027176.1-201ENST00000560204 514 ntBASIC3.25□□□□□ -1.89
COL1A1P02452 AL135786.2-201ENST00000608422 615 ntBASIC3.25□□□□□ -1.89
COL1A1P02452 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.25□□□□□ -1.89
COL1A1P02452 AP006437.1-201ENST00000641440 3685 ntBASIC3.25□□□□□ -1.89
COL1A1P02452 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL1A1P02452 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL1A1P02452 AC109315.1-201ENST00000584143 1347 ntBASIC3.24□□□□□ -1.89
COL1A1P02452 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
COL1A1P02452 Y_RNA.238-201ENST00000364441 102 ntBASIC3.24□□□□□ -1.89
COL1A1P02452 SMC4P1-201ENST00000414479 527 ntBASIC3.24□□□□□ -1.89
COL1A1P02452 AC009963.1-201ENST00000417265 157 ntBASIC3.24□□□□□ -1.89
COL1A1P02452 AL159169.1-201ENST00000421119 127 ntBASIC3.24□□□□□ -1.89
COL1A1P02452 TOMM20P4-201ENST00000427861 435 ntBASIC3.24□□□□□ -1.89
COL1A1P02452 AC243772.1-201ENST00000451620 410 ntBASIC3.24□□□□□ -1.89
COL1A1P02452 snoU13.26-201ENST00000459452 105 ntBASIC3.24□□□□□ -1.89
COL1A1P02452 AC008549.1-201ENST00000512900 643 ntBASIC3.24□□□□□ -1.89
COL1A1P02452 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.24□□□□□ -1.89
COL1A1P02452 EEF1A1P37-201ENST00000522748 715 ntBASIC3.24□□□□□ -1.89
COL1A1P02452 AC090819.1-201ENST00000523800 1111 ntBASIC3.24□□□□□ -1.89
COL1A1P02452 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL1A1P02452 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.24□□□□□ -1.89
COL1A1P02452 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
COL1A1P02452 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL1A1P02452 AC008264.2-201ENST00000610193 3731 ntBASIC3.23□□□□□ -1.89
COL1A1P02452 SEPT7P2-202ENST00000398921 823 ntBASIC3.23□□□□□ -1.89
COL1A1P02452 YPEL5P1-201ENST00000419731 367 ntBASIC3.23□□□□□ -1.89
COL1A1P02452 AL590639.1-201ENST00000456484 337 ntBASIC3.23□□□□□ -1.89
COL1A1P02452 PRELID3BP7-201ENST00000503606 469 ntBASIC3.23□□□□□ -1.89
COL1A1P02452 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.23□□□□□ -1.89
COL1A1P02452 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.23□□□□□ -1.89
COL1A1P02452 NPM1P35-201ENST00000533043 868 ntBASIC3.23□□□□□ -1.89
COL1A1P02452 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.23□□□□□ -1.89
COL1A1P02452 AC055876.1-202ENST00000567053 138 ntBASIC3.23□□□□□ -1.89
COL1A1P02452 AC079089.3-201ENST00000603094 673 ntBASIC3.23□□□□□ -1.89
COL1A1P02452 AC067838.1-201ENST00000606064 577 ntBASIC3.23□□□□□ -1.89
COL1A1P02452 MIR6715B-201ENST00000637172 77 ntBASIC3.23□□□□□ -1.89
COL1A1P02452 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
COL1A1P02452 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL1A1P02452 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
COL1A1P02452 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
COL1A1P02452 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL1A1P02452 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL1A1P02452 AL355379.1-201ENST00000405542 640 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 ATF1P1-201ENST00000406040 927 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.22□□□□□ -1.89
COL1A1P02452 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.22□□□□□ -1.89
COL1A1P02452 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.22□□□□□ -1.89
COL1A1P02452 RNA5SP148-201ENST00000516527 94 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.22□□□□□ -1.89
COL1A1P02452 AP000916.1-201ENST00000533869 835 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 AL133271.1-201ENST00000538229 291 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 AC243972.3-201ENST00000539655 198 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL1A1P02452 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.22□□□□□ -1.89
COL1A1P02452 CTSLP2-204ENST00000629029 392 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.22□□□□□ -1.89
COL1A1P02452 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL1A1P02452 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.22□□□□□ -1.89
COL1A1P02452 ZNF658B-202ENST00000615961 3375 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL1A1P02452 MIR518C-201ENST00000384822 101 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 AL590004.2-201ENST00000404787 371 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 AC004987.3-201ENST00000413879 771 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.22□□□□□ -1.89
COL1A1P02452 EXTL2P1-201ENST00000446218 416 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.22□□□□□ -1.89
COL1A1P02452 RNA5SP320-201ENST00000516263 124 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.22□□□□□ -1.89
COL1A1P02452 AC068446.3-201ENST00000555285 382 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 MIR3186-201ENST00000577404 85 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 MIR4635-201ENST00000583759 79 ntBASIC3.22□□□□□ -1.89
COL1A1P02452 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.22□□□□□ -1.89
COL1A1P02452 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.22□□□□□ -1.89
COL1A1P02452 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.22□□□□□ -1.89
COL1A1P02452 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.22□□□□□ -1.89
COL1A1P02452 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.22□□□□□ -1.89
COL1A1P02452 AC090229.1-201ENST00000590983 1609 ntBASIC3.21□□□□□ -1.89
COL1A1P02452 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.21□□□□□ -1.9
COL1A1P02452 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL1A1P02452 PTP4A1P5-201ENST00000420305 455 ntBASIC3.21□□□□□ -1.9
COL1A1P02452 AL353597.2-202ENST00000434901 373 ntBASIC3.21□□□□□ -1.9
COL1A1P02452 RNU7-170P-201ENST00000459303 61 ntBASIC3.21□□□□□ -1.9
COL1A1P02452 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL1A1P02452 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.21□□□□□ -1.9
COL1A1P02452 AC008413.1-201ENST00000511864 177 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms