Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC1.21□□□□□ -2.22
USH2AO75445 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.21□□□□□ -2.22
USH2AO75445 AC017071.1-201ENST00000564407 2204 ntBASIC1.21□□□□□ -2.22
USH2AO75445 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
USH2AO75445 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 RNA5SP37-201ENST00000365420 130 ntBASIC1.2□□□□□ -2.22
USH2AO75445 SNORA26.9-201ENST00000391322 122 ntBASIC1.2□□□□□ -2.22
USH2AO75445 RPL23AP31-201ENST00000456160 467 ntBASIC1.2□□□□□ -2.22
USH2AO75445 RAD51AP1P1-201ENST00000484195 1001 ntBASIC1.2□□□□□ -2.22
USH2AO75445 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.2□□□□□ -2.22
USH2AO75445 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
USH2AO75445 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
USH2AO75445 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 FCF1P1-201ENST00000432690 571 ntBASIC1.2□□□□□ -2.22
USH2AO75445 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.2□□□□□ -2.22
USH2AO75445 AP000859.1-201ENST00000525536 307 ntBASIC1.2□□□□□ -2.22
USH2AO75445 MIR4738-201ENST00000579134 87 ntBASIC1.2□□□□□ -2.22
USH2AO75445 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC1.2□□□□□ -2.22
USH2AO75445 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.2□□□□□ -2.22
USH2AO75445 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.2□□□□□ -2.22
USH2AO75445 AC233981.2-201ENST00000611524 1614 ntBASIC1.2□□□□□ -2.22
USH2AO75445 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC1.2□□□□□ -2.22
USH2AO75445 AL359893.1-201ENST00000447628 1580 ntBASIC1.2□□□□□ -2.22
USH2AO75445 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.2□□□□□ -2.22
USH2AO75445 RPS12P2-201ENST00000439728 269 ntBASIC1.2□□□□□ -2.22
USH2AO75445 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.2□□□□□ -2.22
USH2AO75445 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.2□□□□□ -2.22
USH2AO75445 AL354710.1-201ENST00000453641 246 ntBASIC1.2□□□□□ -2.22
USH2AO75445 AC004801.2-202ENST00000463559 283 ntBASIC1.2□□□□□ -2.22
USH2AO75445 NPM1P28-201ENST00000492269 840 ntBASIC1.2□□□□□ -2.22
USH2AO75445 AC118282.1-201ENST00000506408 765 ntBASIC1.2□□□□□ -2.22
USH2AO75445 AC108078.2-201ENST00000510750 236 ntBASIC1.2□□□□□ -2.22
USH2AO75445 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.2□□□□□ -2.22
USH2AO75445 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 RN7SKP272-201ENST00000516988 232 ntBASIC1.2□□□□□ -2.22
USH2AO75445 RNA5SP490-201ENST00000517141 136 ntBASIC1.2□□□□□ -2.22
USH2AO75445 AC025034.2-201ENST00000623264 286 ntBASIC1.2□□□□□ -2.22
USH2AO75445 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
USH2AO75445 MAPK10-322ENST00000641485 4530 ntBASIC1.2□□□□□ -2.22
USH2AO75445 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.2□□□□□ -2.22
USH2AO75445 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 RNA5SP88-201ENST00000365560 109 ntBASIC1.2□□□□□ -2.22
USH2AO75445 MIR137-201ENST00000385223 102 ntBASIC1.2□□□□□ -2.22
USH2AO75445 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC1.2□□□□□ -2.22
USH2AO75445 AC006539.3-201ENST00000454258 129 ntBASIC1.2□□□□□ -2.22
USH2AO75445 BTF3L4P4-201ENST00000506381 449 ntBASIC1.2□□□□□ -2.22
USH2AO75445 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC1.2□□□□□ -2.22
USH2AO75445 ELOCP31-201ENST00000540463 467 ntBASIC1.2□□□□□ -2.22
USH2AO75445 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
USH2AO75445 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
USH2AO75445 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC1.19□□□□□ -2.22
USH2AO75445 AC004925.1-201ENST00000624256 2706 ntBASIC1.19□□□□□ -2.22
USH2AO75445 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
USH2AO75445 RPL21P134-201ENST00000453468 483 ntBASIC1.19□□□□□ -2.22
USH2AO75445 AC009101.1-201ENST00000568135 242 ntBASIC1.19□□□□□ -2.22
USH2AO75445 AL355493.4-201ENST00000618530 292 ntBASIC1.19□□□□□ -2.22
USH2AO75445 AC138965.3-201ENST00000623875 498 ntBASIC1.19□□□□□ -2.22
USH2AO75445 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
USH2AO75445 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
USH2AO75445 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
USH2AO75445 MIR93-201ENST00000385024 80 ntBASIC1.19□□□□□ -2.22
USH2AO75445 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
USH2AO75445 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
USH2AO75445 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC1.19□□□□□ -2.22
USH2AO75445 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC1.19□□□□□ -2.22
USH2AO75445 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC1.19□□□□□ -2.22
USH2AO75445 IGLV3-17-201ENST00000519099 244 ntBASIC1.19□□□□□ -2.22
USH2AO75445 OR7A8P-201ENST00000595427 913 ntBASIC1.19□□□□□ -2.22
USH2AO75445 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC1.19□□□□□ -2.22
USH2AO75445 CTSLP2-204ENST00000629029 392 ntBASIC1.19□□□□□ -2.22
USH2AO75445 AC063952.1-203ENST00000634410 658 ntBASIC1.19□□□□□ -2.22
USH2AO75445 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
USH2AO75445 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
USH2AO75445 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
USH2AO75445 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
USH2AO75445 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
USH2AO75445 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
USH2AO75445 RNU6-342P-201ENST00000384521 104 ntBASIC1.19□□□□□ -2.22
USH2AO75445 RNA5SP104-201ENST00000410989 118 ntBASIC1.19□□□□□ -2.22
USH2AO75445 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.19□□□□□ -2.22
USH2AO75445 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC1.19□□□□□ -2.22
USH2AO75445 KATNBL1P2-201ENST00000433311 835 ntBASIC1.19□□□□□ -2.22
USH2AO75445 MTND6P18-201ENST00000439477 513 ntBASIC1.19□□□□□ -2.22
USH2AO75445 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
USH2AO75445 AL035551.1-201ENST00000446931 348 ntBASIC1.19□□□□□ -2.22
USH2AO75445 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms