Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC093331.1-201ENST00000521474 169 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC124293.1-201ENST00000530034 493 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AL391156.1-201ENST00000554965 554 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC090116.1-201ENST00000615679 446 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AL360181.4-201ENST00000621752 134 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC119674.1-207ENST00000641355 633 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AL645568.2-201ENST00000432815 1337 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
RHBDD3Q9Y3P4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RHBDD3Q9Y3P4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RHBDD3Q9Y3P4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 ZNF807-201ENST00000328088 1707 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 RNA5SP51-201ENST00000364750 119 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 SAR1AP2-201ENST00000392696 594 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 AC007066.1-201ENST00000392902 381 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 RNA5SP31-201ENST00000411144 127 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 RN7SKP53-201ENST00000411337 315 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 GOT2P5-201ENST00000433995 546 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 BX679664.1-201ENST00000434429 253 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 GAPDHP39-201ENST00000481866 979 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 SETP14-201ENST00000497538 873 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 AC020893.1-201ENST00000502452 580 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 MTND4LP22-201ENST00000508209 276 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 HMGN1P11-201ENST00000508668 303 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 BNIP3P38-201ENST00000601117 544 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 AP004247.3-201ENST00000608682 624 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 AL163051.2-201ENST00000618976 735 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 MTND2P41-201ENST00000637599 773 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RHBDD3Q9Y3P4 AC007496.3-201ENST00000624987 3443 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC244517.1-201ENST00000606030 2086 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 RNU1-85P-201ENST00000364127 164 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 RNU1-101P-201ENST00000391171 127 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 SNORA57.1-201ENST00000391227 145 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AL354719.1-201ENST00000406535 843 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC068533.1-201ENST00000418542 415 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 YPEL5P1-201ENST00000419731 367 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 DUTP6-201ENST00000425573 462 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AP000907.1-201ENST00000428428 510 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 HSPE1P28-201ENST00000443139 211 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC091959.2-201ENST00000477363 321 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 MTND4LP31-201ENST00000514859 294 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 SNORA48.9-201ENST00000516419 162 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AP000926.4-201ENST00000527351 454 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 DUXAP6-201ENST00000553858 601 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC106734.1-201ENST00000568646 663 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC025588.3-201ENST00000604182 274 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 HSPE1P14-201ENST00000605812 302 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AL391497.1-201ENST00000608671 547 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC073968.1-201ENST00000618594 637 ntBASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RHBDD3Q9Y3P4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms