Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SND1-IT1Q9HBX3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SND1-IT1Q9HBX3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.4□□□□□ -2.02
SND1-IT1Q9HBX3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SND1-IT1Q9HBX3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SND1-IT1Q9HBX3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SND1-IT1Q9HBX3 ZNF807-201ENST00000328088 1707 ntBASIC2.4□□□□□ -2.02
SND1-IT1Q9HBX3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 RNA5SP42-201ENST00000364278 115 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 SNORA73.2-201ENST00000364946 201 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 RNU6-805P-201ENST00000365643 106 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 SNORA51.6-201ENST00000384151 125 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 OR6C69P-201ENST00000394268 893 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 RNU6-575P-201ENST00000411326 105 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC068533.1-201ENST00000418542 415 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC245291.1-201ENST00000419501 328 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 MTCO1P48-201ENST00000448024 1096 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 NUTF2P3-201ENST00000448540 384 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC010655.1-201ENST00000449336 292 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 RPS4XP2-201ENST00000458402 793 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 HMGB1P25-201ENST00000468402 607 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC017015.1-201ENST00000477387 286 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 RPL23AP44-201ENST00000482216 473 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 RPS4XP15-201ENST00000489210 795 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 BOLA3P3-201ENST00000505182 232 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 TXNP6-201ENST00000510190 310 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC010265.1-201ENST00000513509 211 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC093331.1-201ENST00000521474 169 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 OR7E13P-201ENST00000526052 910 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC019227.1-201ENST00000526902 510 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC120057.2-201ENST00000571520 271 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 MIR3186-201ENST00000577404 85 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 MIR5096-201ENST00000583713 70 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 MIR3138-201ENST00000585238 82 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC015726.1-201ENST00000602353 681 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC092474.3-201ENST00000603022 568 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 RPAP2P1-201ENST00000603626 1168 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AL391497.1-201ENST00000608671 547 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AL450489.1-201ENST00000612071 468 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AL355810.1-201ENST00000614629 552 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC008083.4-201ENST00000615076 444 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AL445567.2-201ENST00000618935 498 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 VN1R7P-201ENST00000619242 903 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC018816.2-201ENST00000621460 353 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC110801.1-201ENST00000623590 212 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AC068647.1-201ENST00000489539 2265 ntBASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.4□□□□□ -2.03
SND1-IT1Q9HBX3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC058791.1-201ENST00000608412 3198 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 RLIMP1-201ENST00000339626 1680 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 HMGB1P5-201ENST00000255320 642 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC109780.2-201ENST00000413467 845 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 RPS7P13-201ENST00000413955 498 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC093578.1-201ENST00000415219 368 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms