Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL590282.1-201ENST00000610379 1136 ntBASIC4.99□□□□□ -1.61
VPS11Q9H270 AL136295.6-201ENST00000610486 658 ntBASIC4.99□□□□□ -1.61
VPS11Q9H270 MIR3662-201ENST00000637030 95 ntBASIC4.99□□□□□ -1.61
VPS11Q9H270 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS11Q9H270 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS11Q9H270 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS11Q9H270 ELL2P4-201ENST00000446870 1376 ntBASIC4.99□□□□□ -1.61
VPS11Q9H270 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
VPS11Q9H270 AL139811.1-201ENST00000424779 2299 ntBASIC4.99□□□□□ -1.61
VPS11Q9H270 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VPS11Q9H270 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS11Q9H270 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS11Q9H270 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VPS11Q9H270 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS11Q9H270 AL122126.1-201ENST00000546905 1318 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
VPS11Q9H270 RARSP1-201ENST00000542842 1418 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VPS11Q9H270 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS11Q9H270 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS11Q9H270 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS11Q9H270 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS11Q9H270 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS11Q9H270 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS11Q9H270 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS11Q9H270 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VPS11Q9H270 Y_RNA.573-201ENST00000384763 105 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 SNORA77-201ENST00000408716 125 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 RNA5SP178-201ENST00000410380 128 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS11Q9H270 RPL35AP24-201ENST00000413846 330 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS11Q9H270 MTCO3P12-201ENST00000416718 547 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AL161631.1-201ENST00000417933 486 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 RPS15AP40-201ENST00000419621 391 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 VDAC1P6-201ENST00000430062 855 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS11Q9H270 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS11Q9H270 USP9YP12-201ENST00000450481 570 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS11Q9H270 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS11Q9H270 MTCO3P2-201ENST00000457365 171 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS11Q9H270 AC009127.1-201ENST00000467090 155 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AC010301.1-201ENST00000473936 355 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 RN7SL799P-201ENST00000475891 298 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 LARP1BP2-201ENST00000486594 519 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AC104109.1-201ENST00000498563 436 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AC010350.1-201ENST00000504908 231 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AC104057.1-201ENST00000515547 497 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AC008802.1-201ENST00000519121 791 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS11Q9H270 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS11Q9H270 AC012339.2-201ENST00000523996 453 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS11Q9H270 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS11Q9H270 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS11Q9H270 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS11Q9H270 AC024940.3-201ENST00000538551 316 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 PDCD5P1-201ENST00000543528 309 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS11Q9H270 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS11Q9H270 CBX3P5-201ENST00000552017 521 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 MIR3614-201ENST00000581261 86 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS11Q9H270 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS11Q9H270 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS11Q9H270 AL132765.2-201ENST00000610812 351 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AC068722.2-201ENST00000618734 544 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AL713922.2-201ENST00000619384 716 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AL672167.1-205ENST00000641112 3080 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 AP001273.1-201ENST00000624493 3152 ntBASIC4.98□□□□□ -1.61
VPS11Q9H270 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS11Q9H270 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS11Q9H270 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VPS11Q9H270 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
VPS11Q9H270 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS11Q9H270 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS11Q9H270 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS11Q9H270 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS11Q9H270 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS11Q9H270 NEAT1-202ENST00000501122 22743 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS11Q9H270 RPL21P132-201ENST00000331267 462 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 SNORA73.1-201ENST00000363107 205 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 RNU6-433P-201ENST00000363216 104 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 RNU6-216P-201ENST00000363282 104 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 RNU5F-7P-201ENST00000363696 115 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 MT-TR-201ENST00000387439 65 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 RN7SKP114-201ENST00000410327 279 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 RN7SKP293-201ENST00000411389 296 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 AC069218.2-201ENST00000411665 344 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 AL133384.1-201ENST00000412744 351 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS11Q9H270 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS11Q9H270 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VPS11Q9H270 AC108075.1-201ENST00000424692 529 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 AL353729.1-201ENST00000425044 720 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 AL513185.2-201ENST00000425543 193 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 239.3 ms