Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AL365396.1-201ENST00000430854 671 ntBASIC4.33□□□□□ -1.72
TOPBP1Q92547 RN7SL636P-201ENST00000497504 294 ntBASIC4.33□□□□□ -1.72
TOPBP1Q92547 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.33□□□□□ -1.72
TOPBP1Q92547 AC007423.1-201ENST00000605009 627 ntBASIC4.33□□□□□ -1.72
TOPBP1Q92547 AL592295.2-201ENST00000612578 206 ntBASIC4.33□□□□□ -1.72
TOPBP1Q92547 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TOPBP1Q92547 ZNF72P-201ENST00000425869 1908 ntBASIC4.32□□□□□ -1.72
TOPBP1Q92547 RNA5SP383-201ENST00000362934 120 ntBASIC4.32□□□□□ -1.72
TOPBP1Q92547 RNU6-76P-201ENST00000384060 104 ntBASIC4.32□□□□□ -1.72
TOPBP1Q92547 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
TOPBP1Q92547 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.32□□□□□ -1.72
TOPBP1Q92547 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.32□□□□□ -1.72
TOPBP1Q92547 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TOPBP1Q92547 AL359511.1-201ENST00000402970 211 ntBASIC4.31□□□□□ -1.72
TOPBP1Q92547 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.31□□□□□ -1.72
TOPBP1Q92547 HMGN1P5-201ENST00000448591 263 ntBASIC4.31□□□□□ -1.72
TOPBP1Q92547 AC010620.2-201ENST00000600135 313 ntBASIC4.31□□□□□ -1.72
TOPBP1Q92547 AC005046.1-201ENST00000608515 625 ntBASIC4.31□□□□□ -1.72
TOPBP1Q92547 PISRT1-201ENST00000626175 531 ntBASIC4.31□□□□□ -1.72
TOPBP1Q92547 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TOPBP1Q92547 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
TOPBP1Q92547 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.31□□□□□ -1.72
TOPBP1Q92547 AC004987.3-201ENST00000413879 771 ntBASIC4.31□□□□□ -1.72
TOPBP1Q92547 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.31□□□□□ -1.72
TOPBP1Q92547 AL353705.4-201ENST00000449661 238 ntBASIC4.31□□□□□ -1.72
TOPBP1Q92547 AC004801.2-202ENST00000463559 283 ntBASIC4.31□□□□□ -1.72
TOPBP1Q92547 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.31□□□□□ -1.72
TOPBP1Q92547 AC008716.1-201ENST00000511084 513 ntBASIC4.31□□□□□ -1.72
TOPBP1Q92547 Z82195.1-201ENST00000604558 398 ntBASIC4.31□□□□□ -1.72
TOPBP1Q92547 SNORA35B-201ENST00000607417 129 ntBASIC4.31□□□□□ -1.72
TOPBP1Q92547 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TOPBP1Q92547 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TOPBP1Q92547 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.3□□□□□ -1.72
TOPBP1Q92547 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TOPBP1Q92547 RPL21P132-201ENST00000331267 462 ntBASIC4.3□□□□□ -1.72
TOPBP1Q92547 MIR181A2-201ENST00000384863 110 ntBASIC4.3□□□□□ -1.72
TOPBP1Q92547 AL591623.2-201ENST00000449978 222 ntBASIC4.3□□□□□ -1.72
TOPBP1Q92547 AC034244.2-201ENST00000514668 858 ntBASIC4.3□□□□□ -1.72
TOPBP1Q92547 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.3□□□□□ -1.72
TOPBP1Q92547 AP000867.2-201ENST00000532468 320 ntBASIC4.3□□□□□ -1.72
TOPBP1Q92547 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.3□□□□□ -1.72
TOPBP1Q92547 MIR3605-201ENST00000583214 100 ntBASIC4.3□□□□□ -1.72
TOPBP1Q92547 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.3□□□□□ -1.72
TOPBP1Q92547 HSPA8P4-201ENST00000511877 1920 ntBASIC4.29□□□□□ -1.72
TOPBP1Q92547 RNA5SP99-201ENST00000364020 114 ntBASIC4.29□□□□□ -1.72
TOPBP1Q92547 Y_RNA.238-201ENST00000364441 102 ntBASIC4.29□□□□□ -1.72
TOPBP1Q92547 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.29□□□□□ -1.72
TOPBP1Q92547 AL121877.1-201ENST00000453704 622 ntBASIC4.29□□□□□ -1.72
TOPBP1Q92547 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.29□□□□□ -1.72
TOPBP1Q92547 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.29□□□□□ -1.72
TOPBP1Q92547 AC010680.4-201ENST00000605334 543 ntBASIC4.29□□□□□ -1.72
TOPBP1Q92547 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.29□□□□□ -1.72
TOPBP1Q92547 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.28□□□□□ -1.72
TOPBP1Q92547 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TOPBP1Q92547 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.28□□□□□ -1.72
TOPBP1Q92547 RPS26P40-201ENST00000435209 294 ntBASIC4.28□□□□□ -1.72
TOPBP1Q92547 RPS27AP9-201ENST00000477681 438 ntBASIC4.28□□□□□ -1.72
TOPBP1Q92547 AC093278.1-201ENST00000494700 600 ntBASIC4.28□□□□□ -1.72
TOPBP1Q92547 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.28□□□□□ -1.72
TOPBP1Q92547 AC100870.1-201ENST00000522035 505 ntBASIC4.28□□□□□ -1.72
TOPBP1Q92547 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.28□□□□□ -1.72
TOPBP1Q92547 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.28□□□□□ -1.72
TOPBP1Q92547 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TOPBP1Q92547 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TOPBP1Q92547 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TOPBP1Q92547 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TOPBP1Q92547 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.27□□□□□ -1.73
TOPBP1Q92547 Z98941.1-201ENST00000407764 100 ntBASIC4.27□□□□□ -1.73
TOPBP1Q92547 AL451074.5-201ENST00000415894 435 ntBASIC4.27□□□□□ -1.73
TOPBP1Q92547 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.27□□□□□ -1.73
TOPBP1Q92547 DPH3P2-201ENST00000422618 250 ntBASIC4.27□□□□□ -1.73
TOPBP1Q92547 AL031736.2-201ENST00000426573 787 ntBASIC4.27□□□□□ -1.73
TOPBP1Q92547 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.27□□□□□ -1.73
TOPBP1Q92547 AC096638.1-201ENST00000444678 216 ntBASIC4.27□□□□□ -1.73
TOPBP1Q92547 SEPT7P3-201ENST00000455017 621 ntBASIC4.27□□□□□ -1.73
TOPBP1Q92547 AC008280.2-201ENST00000455473 307 ntBASIC4.27□□□□□ -1.73
TOPBP1Q92547 RPL30P9-201ENST00000465586 330 ntBASIC4.27□□□□□ -1.73
TOPBP1Q92547 RPL21P99-201ENST00000480369 423 ntBASIC4.27□□□□□ -1.73
TOPBP1Q92547 FAM172BP-201ENST00000487497 1089 ntBASIC4.27□□□□□ -1.73
TOPBP1Q92547 GOLGA5P1-201ENST00000507317 980 ntBASIC4.27□□□□□ -1.73
TOPBP1Q92547 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.27□□□□□ -1.73
TOPBP1Q92547 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
TOPBP1Q92547 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.27□□□□□ -1.73
TOPBP1Q92547 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TOPBP1Q92547 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC4.26□□□□□ -1.73
TOPBP1Q92547 AC118282.1-201ENST00000506408 765 ntBASIC4.26□□□□□ -1.73
TOPBP1Q92547 RNU6-548P-201ENST00000517083 115 ntBASIC4.26□□□□□ -1.73
TOPBP1Q92547 AC128657.1-201ENST00000549459 145 ntBASIC4.26□□□□□ -1.73
TOPBP1Q92547 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TOPBP1Q92547 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.26□□□□□ -1.73
TOPBP1Q92547 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TOPBP1Q92547 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TOPBP1Q92547 RNU6-249P-201ENST00000363016 102 ntBASIC4.26□□□□□ -1.73
TOPBP1Q92547 RN7SKP285-201ENST00000410137 318 ntBASIC4.26□□□□□ -1.73
TOPBP1Q92547 PTP4A1P5-201ENST00000420305 455 ntBASIC4.26□□□□□ -1.73
TOPBP1Q92547 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.26□□□□□ -1.73
TOPBP1Q92547 AL589765.3-201ENST00000446084 462 ntBASIC4.26□□□□□ -1.73
TOPBP1Q92547 FGF7P3-201ENST00000454645 303 ntBASIC4.26□□□□□ -1.73
TOPBP1Q92547 RN7SL75P-201ENST00000461926 281 ntBASIC4.26□□□□□ -1.73
TOPBP1Q92547 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms