Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 RNU6-115P-201ENST00000364310 107 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 RNU6-398P-201ENST00000384143 109 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 RNU4-6P-201ENST00000410804 122 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC106883.1-201ENST00000418805 562 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC244098.2-201ENST00000422068 99 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 RPS27AP7-201ENST00000422792 455 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AL356276.2-201ENST00000435919 558 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 HIGD1AP11-201ENST00000438361 280 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AL358794.1-201ENST00000445689 381 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AL009048.1-201ENST00000450437 298 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 DUXAP8-207ENST00000456786 622 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 RN7SKP289-201ENST00000517244 295 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 NDUFA5P2-201ENST00000519723 344 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 OR7E13P-201ENST00000526052 910 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AP000790.1-201ENST00000528891 737 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 DEFB130C-202ENST00000530001 230 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AL049838.1-201ENST00000563647 981 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 MIR4700-201ENST00000578311 74 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC104785.1-201ENST00000603220 588 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC112230.1-201ENST00000604342 547 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AL365503.1-201ENST00000605247 905 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC024060.1-201ENST00000607052 494 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 RNU4-89P-201ENST00000607443 133 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC090912.3-201ENST00000609775 533 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC009237.15-201ENST00000610252 501 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 DUXAP10-204ENST00000612052 616 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC100827.5-201ENST00000615883 426 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC123767.1-202ENST00000620407 817 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC073530.2-201ENST00000623987 261 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 AC090506.2-201ENST00000624521 419 ntBASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC71LQ8N9Z2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC139713.2-214ENST00000642059 1811 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC011978.2-201ENST00000569835 2054 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 RNU6-839P-201ENST00000363347 108 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 Y_RNA.493-201ENST00000384422 102 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 SNORD116-12-201ENST00000384468 92 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 MT-TC-201ENST00000387405 66 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 RNU6-584P-201ENST00000410350 95 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 MTCO2P8-201ENST00000412213 658 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AL035410.1-201ENST00000427409 427 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 RPL31P54-201ENST00000429803 370 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 RPL7P52-201ENST00000449200 742 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 TPT1P13-201ENST00000449760 499 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 RPL5P24-201ENST00000463742 885 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC006463.2-201ENST00000473326 348 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 GAPDHP39-201ENST00000481866 979 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC105137.1-201ENST00000484355 562 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 RNF138P1-201ENST00000502765 546 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC084024.2-201ENST00000503480 791 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC113420.1-201ENST00000507903 571 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 MTCYBP37-201ENST00000510642 1133 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 MTCO3P44-201ENST00000510977 541 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 RNA5SP135-201ENST00000517019 125 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 MTCO1P49-201ENST00000523429 802 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 OR10V3P-201ENST00000525712 725 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms