Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL049536.1-201ENST00000625043 744 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AL392088.2-201ENST00000637607 285 ntBASIC4.02□□□□□ -1.77
CDH12P55289 AL451142.2-201ENST00000429076 2090 ntBASIC4.02□□□□□ -1.77
CDH12P55289 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH12P55289 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH12P55289 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CDH12P55289 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH12P55289 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH12P55289 MTND4P4-201ENST00000439033 1366 ntBASIC4.02□□□□□ -1.77
CDH12P55289 ELL2P4-201ENST00000446870 1376 ntBASIC4.02□□□□□ -1.77
CDH12P55289 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CDH12P55289 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH12P55289 AC007390.2-201ENST00000606229 3803 ntBASIC4.01□□□□□ -1.77
CDH12P55289 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH12P55289 AC130650.2-201ENST00000618736 2403 ntBASIC4.01□□□□□ -1.77
CDH12P55289 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH12P55289 ZNF962P-201ENST00000443465 3140 ntBASIC4.01□□□□□ -1.77
CDH12P55289 AC090971.4-201ENST00000560291 1800 ntBASIC4.01□□□□□ -1.77
CDH12P55289 Y_RNA.97-201ENST00000363094 102 ntBASIC4.01□□□□□ -1.77
CDH12P55289 RNU4-91P-201ENST00000364778 135 ntBASIC4.01□□□□□ -1.77
CDH12P55289 RNU6-1119P-201ENST00000384349 108 ntBASIC4.01□□□□□ -1.77
CDH12P55289 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CDH12P55289 RNU6-952P-201ENST00000391164 108 ntBASIC4.01□□□□□ -1.77
CDH12P55289 RNU6-192P-201ENST00000391253 100 ntBASIC4.01□□□□□ -1.77
CDH12P55289 AL663109.1-201ENST00000411498 844 ntBASIC4.01□□□□□ -1.77
CDH12P55289 RPS7P13-201ENST00000413955 498 ntBASIC4.01□□□□□ -1.77
CDH12P55289 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH12P55289 UQCRBP1-201ENST00000421129 336 ntBASIC4.01□□□□□ -1.77
CDH12P55289 RBMY1KP-201ENST00000423480 476 ntBASIC4.01□□□□□ -1.77
CDH12P55289 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH12P55289 OR4F13P-201ENST00000428478 931 ntBASIC4.01□□□□□ -1.77
CDH12P55289 USP9YP14-201ENST00000430663 563 ntBASIC4.01□□□□□ -1.77
CDH12P55289 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH12P55289 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH12P55289 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH12P55289 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH12P55289 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH12P55289 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH12P55289 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH12P55289 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH12P55289 AL592447.1-201ENST00000447592 540 ntBASIC4.01□□□□□ -1.77
CDH12P55289 RPL5P32-201ENST00000454085 879 ntBASIC4.01□□□□□ -1.77
CDH12P55289 RN7SL354P-201ENST00000469282 294 ntBASIC4.01□□□□□ -1.77
CDH12P55289 MTND6P6-201ENST00000478031 263 ntBASIC4.01□□□□□ -1.77
CDH12P55289 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH12P55289 AC108145.1-201ENST00000503770 153 ntBASIC4.01□□□□□ -1.77
CDH12P55289 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH12P55289 AC017037.1-201ENST00000508460 471 ntBASIC4.01□□□□□ -1.77
CDH12P55289 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH12P55289 AC010625.1-201ENST00000511296 403 ntBASIC4.01□□□□□ -1.77
CDH12P55289 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH12P55289 IGHV3-32-201ENST00000519182 355 ntBASIC4.01□□□□□ -1.77
CDH12P55289 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH12P55289 MTCYBP20-201ENST00000524239 1129 ntBASIC4.01□□□□□ -1.77
CDH12P55289 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.01□□□□□ -1.77
CDH12P55289 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH12P55289 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH12P55289 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH12P55289 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH12P55289 AC091489.2-201ENST00000566263 604 ntBASIC4.01□□□□□ -1.77
CDH12P55289 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH12P55289 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH12P55289 AL139395.1-201ENST00000603662 160 ntBASIC4.01□□□□□ -1.77
CDH12P55289 AC004492.1-201ENST00000607036 742 ntBASIC4.01□□□□□ -1.77
CDH12P55289 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH12P55289 AC099842.1-201ENST00000619919 596 ntBASIC4.01□□□□□ -1.77
CDH12P55289 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH12P55289 AL023881.1-201ENST00000621088 301 ntBASIC4.01□□□□□ -1.77
CDH12P55289 AL590240.3-201ENST00000621416 943 ntBASIC4.01□□□□□ -1.77
CDH12P55289 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH12P55289 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH12P55289 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH12P55289 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH12P55289 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CDH12P55289 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH12P55289 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CDH12P55289 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CDH12P55289 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CDH12P55289 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH12P55289 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4□□□□□ -1.77
CDH12P55289 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CDH12P55289 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4□□□□□ -1.77
CDH12P55289 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4□□□□□ -1.77
CDH12P55289 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH12P55289 FGF7P2-201ENST00000332473 296 ntBASIC4□□□□□ -1.77
CDH12P55289 MIR3065-201ENST00000390137 79 ntBASIC4□□□□□ -1.77
CDH12P55289 GLULP6-201ENST00000399502 913 ntBASIC4□□□□□ -1.77
CDH12P55289 OR8G2P-201ENST00000412796 908 ntBASIC4□□□□□ -1.77
CDH12P55289 AC109780.2-201ENST00000413467 845 ntBASIC4□□□□□ -1.77
CDH12P55289 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4□□□□□ -1.77
CDH12P55289 AMMECR1LP1-201ENST00000415152 841 ntBASIC4□□□□□ -1.77
CDH12P55289 AL161631.1-201ENST00000417933 486 ntBASIC4□□□□□ -1.77
CDH12P55289 AL389915.1-201ENST00000422463 466 ntBASIC4□□□□□ -1.77
CDH12P55289 RPL7AP25-201ENST00000423357 805 ntBASIC4□□□□□ -1.77
CDH12P55289 RPL30P3-201ENST00000424262 333 ntBASIC4□□□□□ -1.77
CDH12P55289 COX6CP15-201ENST00000426313 211 ntBASIC4□□□□□ -1.77
CDH12P55289 NANOGP6-201ENST00000429190 847 ntBASIC4□□□□□ -1.77
CDH12P55289 USP9YP9-201ENST00000429406 715 ntBASIC4□□□□□ -1.77
CDH12P55289 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4□□□□□ -1.77
CDH12P55289 MTND1P34-201ENST00000438556 671 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms