Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.01□□□□□ -1.77
LDLRP01130 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LDLRP01130 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LDLRP01130 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.01□□□□□ -1.77
LDLRP01130 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.01□□□□□ -1.77
LDLRP01130 SNORD116-9-201ENST00000384000 95 ntBASIC4.01□□□□□ -1.77
LDLRP01130 SNORD116-3-201ENST00000384287 95 ntBASIC4.01□□□□□ -1.77
LDLRP01130 SNORD116-7-201ENST00000384404 95 ntBASIC4.01□□□□□ -1.77
LDLRP01130 SNORD116-5-201ENST00000384462 95 ntBASIC4.01□□□□□ -1.77
LDLRP01130 RNA5SP80-201ENST00000410475 111 ntBASIC4.01□□□□□ -1.77
LDLRP01130 RN7SKP159-201ENST00000410657 292 ntBASIC4.01□□□□□ -1.77
LDLRP01130 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.01□□□□□ -1.77
LDLRP01130 AC008280.1-201ENST00000418851 412 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.01□□□□□ -1.77
LDLRP01130 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.01□□□□□ -1.77
LDLRP01130 AL117339.2-201ENST00000430475 180 ntBASIC4.01□□□□□ -1.77
LDLRP01130 USP9YP31-201ENST00000431405 881 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.01□□□□□ -1.77
LDLRP01130 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.01□□□□□ -1.77
LDLRP01130 AL133217.1-201ENST00000450980 425 ntBASIC4.01□□□□□ -1.77
LDLRP01130 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.01□□□□□ -1.77
LDLRP01130 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.01□□□□□ -1.77
LDLRP01130 RAD23BP3-201ENST00000454157 1152 ntBASIC4.01□□□□□ -1.77
LDLRP01130 RPL35AP15-201ENST00000468042 339 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AC104164.2-201ENST00000496953 495 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.01□□□□□ -1.77
LDLRP01130 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.01□□□□□ -1.77
LDLRP01130 AC116353.3-201ENST00000511215 249 ntBASIC4.01□□□□□ -1.77
LDLRP01130 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LDLRP01130 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.01□□□□□ -1.77
LDLRP01130 RNU6-1225P-201ENST00000516336 65 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.01□□□□□ -1.77
LDLRP01130 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.01□□□□□ -1.77
LDLRP01130 AC090281.1-201ENST00000523019 276 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AC005832.3-201ENST00000537929 631 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AC023050.2-201ENST00000544968 387 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AC010198.2-201ENST00000550612 259 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.01□□□□□ -1.77
LDLRP01130 NBEAP1-201ENST00000554452 979 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.01□□□□□ -1.77
LDLRP01130 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.01□□□□□ -1.77
LDLRP01130 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.01□□□□□ -1.77
LDLRP01130 AC138915.2-201ENST00000569776 97 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AC103987.3-201ENST00000582071 292 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.01□□□□□ -1.77
LDLRP01130 AC020914.4-201ENST00000597690 277 ntBASIC4.01□□□□□ -1.77
LDLRP01130 HMGB1P50-201ENST00000605814 607 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AL451074.6-201ENST00000608512 729 ntBASIC4.01□□□□□ -1.77
LDLRP01130 MIR8059-201ENST00000620427 81 ntBASIC4.01□□□□□ -1.77
LDLRP01130 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AC112484.5-201ENST00000624189 228 ntBASIC4.01□□□□□ -1.77
LDLRP01130 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.01□□□□□ -1.77
LDLRP01130 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LDLRP01130 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LDLRP01130 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LDLRP01130 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LDLRP01130 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LDLRP01130 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.01□□□□□ -1.77
LDLRP01130 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LDLRP01130 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LDLRP01130 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4□□□□□ -1.77
LDLRP01130 FAM133CP-201ENST00000332869 704 ntBASIC4□□□□□ -1.77
LDLRP01130 RNU5D-1-201ENST00000363299 116 ntBASIC4□□□□□ -1.77
LDLRP01130 RNU1-130P-201ENST00000363930 160 ntBASIC4□□□□□ -1.77
LDLRP01130 RNU4-24P-201ENST00000364565 139 ntBASIC4□□□□□ -1.77
LDLRP01130 RN7SKP56-201ENST00000410513 331 ntBASIC4□□□□□ -1.77
LDLRP01130 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4□□□□□ -1.77
LDLRP01130 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4□□□□□ -1.77
LDLRP01130 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4□□□□□ -1.77
LDLRP01130 SEPT2P1-201ENST00000419651 180 ntBASIC4□□□□□ -1.77
LDLRP01130 MTCO3P1-205ENST00000422088 832 ntBASIC4□□□□□ -1.77
LDLRP01130 AL391219.1-201ENST00000422570 483 ntBASIC4□□□□□ -1.77
LDLRP01130 EIF1P3-201ENST00000423841 334 ntBASIC4□□□□□ -1.77
LDLRP01130 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4□□□□□ -1.77
LDLRP01130 COX6CP15-201ENST00000426313 211 ntBASIC4□□□□□ -1.77
LDLRP01130 RPL7P2-201ENST00000427639 268 ntBASIC4□□□□□ -1.77
LDLRP01130 IFNNP1-201ENST00000429219 553 ntBASIC4□□□□□ -1.77
LDLRP01130 AL365396.1-201ENST00000430854 671 ntBASIC4□□□□□ -1.77
LDLRP01130 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4□□□□□ -1.77
LDLRP01130 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4□□□□□ -1.77
LDLRP01130 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4□□□□□ -1.77
LDLRP01130 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4□□□□□ -1.77
LDLRP01130 AL034418.1-201ENST00000448675 860 ntBASIC4□□□□□ -1.77
LDLRP01130 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4□□□□□ -1.77
LDLRP01130 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4□□□□□ -1.77
LDLRP01130 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4□□□□□ -1.77
LDLRP01130 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4□□□□□ -1.77
LDLRP01130 RPS3AP22-201ENST00000488297 769 ntBASIC4□□□□□ -1.77
LDLRP01130 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4□□□□□ -1.77
LDLRP01130 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4□□□□□ -1.77
LDLRP01130 RNU5A-4P-201ENST00000516588 111 ntBASIC4□□□□□ -1.77
LDLRP01130 SNORA48.10-201ENST00000516965 160 ntBASIC4□□□□□ -1.77
LDLRP01130 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4□□□□□ -1.77
LDLRP01130 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4□□□□□ -1.77
LDLRP01130 AP000889.1-201ENST00000530968 660 ntBASIC4□□□□□ -1.77
LDLRP01130 AC006064.5-201ENST00000541782 248 ntBASIC4□□□□□ -1.77
LDLRP01130 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4□□□□□ -1.77
LDLRP01130 AC090888.1-201ENST00000561335 1141 ntBASIC4□□□□□ -1.77
LDLRP01130 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4□□□□□ -1.77
LDLRP01130 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms