Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC10.06□□□□□ -0.8
MSH5O43196 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
MSH5O43196 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
MSH5O43196 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
MSH5O43196 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
MSH5O43196 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
MSH5O43196 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC10.06□□□□□ -0.8
MSH5O43196 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
MSH5O43196 RN7SKP184-201ENST00000362348 333 ntBASIC10.06□□□□□ -0.8
MSH5O43196 SNORD115-32-201ENST00000364079 82 ntBASIC10.06□□□□□ -0.8
MSH5O43196 RNU6-309P-201ENST00000364573 106 ntBASIC10.06□□□□□ -0.8
MSH5O43196 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC10.06□□□□□ -0.8
MSH5O43196 RNU6-979P-201ENST00000383896 107 ntBASIC10.06□□□□□ -0.8
MSH5O43196 Y_RNA.565-201ENST00000384719 101 ntBASIC10.06□□□□□ -0.8
MSH5O43196 AL590143.1-201ENST00000405071 138 ntBASIC10.06□□□□□ -0.8
MSH5O43196 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC10.06□□□□□ -0.8
MSH5O43196 AL358472.1-201ENST00000431295 329 ntBASIC10.06□□□□□ -0.8
MSH5O43196 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC10.06□□□□□ -0.8
MSH5O43196 AC099344.1-201ENST00000433548 492 ntBASIC10.06□□□□□ -0.8
MSH5O43196 AC010095.1-201ENST00000443543 144 ntBASIC10.06□□□□□ -0.8
MSH5O43196 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC10.06□□□□□ -0.8
MSH5O43196 NDUFB5P1-201ENST00000508134 564 ntBASIC10.06□□□□□ -0.8
MSH5O43196 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
MSH5O43196 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC10.06□□□□□ -0.8
MSH5O43196 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC10.06□□□□□ -0.8
MSH5O43196 OR4N1P-201ENST00000554847 949 ntBASIC10.06□□□□□ -0.8
MSH5O43196 AC026826.3-201ENST00000561747 158 ntBASIC10.06□□□□□ -0.8
MSH5O43196 AL031274.2-201ENST00000599419 203 ntBASIC10.06□□□□□ -0.8
MSH5O43196 AL357075.2-201ENST00000614906 189 ntBASIC10.06□□□□□ -0.8
MSH5O43196 Six3os1_2.1-201ENST00000616963 217 ntBASIC10.06□□□□□ -0.8
MSH5O43196 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC10.06□□□□□ -0.8
MSH5O43196 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC10.06□□□□□ -0.8
MSH5O43196 MROH3P-201ENST00000435735 2676 ntBASIC10.06□□□□□ -0.8
MSH5O43196 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
MSH5O43196 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC10.06□□□□□ -0.8
MSH5O43196 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
MSH5O43196 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
MSH5O43196 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC10.06□□□□□ -0.8
MSH5O43196 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
MSH5O43196 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
MSH5O43196 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
MSH5O43196 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
MSH5O43196 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC10.05□□□□□ -0.8
MSH5O43196 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
MSH5O43196 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC10.05□□□□□ -0.8
MSH5O43196 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
MSH5O43196 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
MSH5O43196 AC078880.4-201ENST00000617627 1749 ntBASIC10.05□□□□□ -0.8
MSH5O43196 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
MSH5O43196 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC10.05□□□□□ -0.8
MSH5O43196 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC10.05□□□□□ -0.8
MSH5O43196 RN7SKP48-201ENST00000365031 328 ntBASIC10.05□□□□□ -0.8
MSH5O43196 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
MSH5O43196 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC10.05□□□□□ -0.8
MSH5O43196 DDX11L10-201ENST00000430178 571 ntBASIC10.05□□□□□ -0.8
MSH5O43196 EZH2P1-201ENST00000431167 291 ntBASIC10.05□□□□□ -0.8
MSH5O43196 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC10.05□□□□□ -0.8
MSH5O43196 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC10.05□□□□□ -0.8
MSH5O43196 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC10.05□□□□□ -0.8
MSH5O43196 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC10.05□□□□□ -0.8
MSH5O43196 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC10.05□□□□□ -0.8
MSH5O43196 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
MSH5O43196 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC10.05□□□□□ -0.8
MSH5O43196 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC10.05□□□□□ -0.8
MSH5O43196 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC10.05□□□□□ -0.8
MSH5O43196 AC243725.1-201ENST00000637164 436 ntBASIC10.05□□□□□ -0.8
MSH5O43196 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
MSH5O43196 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
MSH5O43196 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
MSH5O43196 AL359693.1-201ENST00000614959 2407 ntBASIC10.05□□□□□ -0.8
MSH5O43196 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC10.05□□□□□ -0.8
MSH5O43196 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
MSH5O43196 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
MSH5O43196 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
MSH5O43196 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
MSH5O43196 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
MSH5O43196 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC10.04□□□□□ -0.8
MSH5O43196 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
MSH5O43196 Y_RNA.229-201ENST00000364347 113 ntBASIC10.04□□□□□ -0.8
MSH5O43196 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
MSH5O43196 Y_RNA.528-201ENST00000384575 108 ntBASIC10.04□□□□□ -0.8
MSH5O43196 SNORA11D-201ENST00000408548 128 ntBASIC10.04□□□□□ -0.8
MSH5O43196 SNORA11E-201ENST00000408778 128 ntBASIC10.04□□□□□ -0.8
MSH5O43196 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC10.04□□□□□ -0.8
MSH5O43196 AP006222.1-205ENST00000450734 457 ntBASIC10.04□□□□□ -0.8
MSH5O43196 AKR1D1P1-201ENST00000457236 936 ntBASIC10.04□□□□□ -0.8
MSH5O43196 RN7SL19P-201ENST00000462522 306 ntBASIC10.04□□□□□ -0.8
MSH5O43196 RPL23AP45-201ENST00000476406 468 ntBASIC10.04□□□□□ -0.8
MSH5O43196 MIR6889-201ENST00000613185 59 ntBASIC10.04□□□□□ -0.8
MSH5O43196 AC090132.2-201ENST00000615881 347 ntBASIC10.04□□□□□ -0.8
MSH5O43196 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC10.04□□□□□ -0.8
MSH5O43196 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
MSH5O43196 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
MSH5O43196 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
MSH5O43196 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
MSH5O43196 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
MSH5O43196 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
MSH5O43196 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
MSH5O43196 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
MSH5O43196 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 249.7 ms