Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 PABPC1P9-201ENST00000426076 1612 ntBASIC4.39□□□□□ -1.71
PCDH17O14917 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH17O14917 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDH17O14917 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDH17O14917 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH17O14917 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH17O14917 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH17O14917 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDH17O14917 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH17O14917 RNU6-289P-201ENST00000364093 107 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 RNU4-91P-201ENST00000364778 135 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 MIR153-1-201ENST00000384914 90 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDH17O14917 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH17O14917 RWDD4P2-201ENST00000426392 563 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 RPL23AP1-201ENST00000428990 471 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 RPS27AP12-201ENST00000429552 465 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDH17O14917 PRELID3BP10-201ENST00000431957 584 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDH17O14917 AC127537.2-201ENST00000439258 465 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AC002381.1-201ENST00000447049 280 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDH17O14917 AC005008.1-201ENST00000456151 612 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDH17O14917 SCARNA10-201ENST00000459255 330 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH17O14917 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDH17O14917 AC010424.1-201ENST00000506336 297 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDH17O14917 MTCO3P7-201ENST00000510008 774 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AC091965.2-201ENST00000512324 613 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AC116347.2-201ENST00000514912 523 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDH17O14917 AP003385.6-201ENST00000531603 374 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AP000873.5-201ENST00000533906 236 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.38□□□□□ -1.71
PCDH17O14917 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDH17O14917 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDH17O14917 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDH17O14917 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDH17O14917 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDH17O14917 MIR4277-201ENST00000578298 84 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AP001180.3-201ENST00000582221 145 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AC069061.3-201ENST00000582254 823 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AC073091.2-201ENST00000603205 907 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AC103792.1-201ENST00000603591 919 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AL391497.1-201ENST00000608671 547 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDH17O14917 AP006248.2-201ENST00000623309 592 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AC025048.6-202ENST00000627667 438 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 U3.53-201ENST00000628922 216 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 AL359893.1-201ENST00000447628 1580 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 OR11H5P-202ENST00000641612 1325 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDH17O14917 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH17O14917 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH17O14917 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH17O14917 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH17O14917 AC009951.1-201ENST00000623674 2614 ntBASIC4.38□□□□□ -1.71
PCDH17O14917 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH17O14917 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH17O14917 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH17O14917 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDH17O14917 AC108467.2-201ENST00000617640 1597 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH17O14917 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH17O14917 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH17O14917 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PCDH17O14917 RNU6-28P-201ENST00000362378 107 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 Y_RNA.436-201ENST00000384097 102 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 RNU1-82P-201ENST00000390851 165 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 RN7SKP142-201ENST00000411236 328 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 AC109780.2-201ENST00000413467 845 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 MTCYBP24-201ENST00000420387 1106 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDH17O14917 CYCSP46-201ENST00000423569 204 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDH17O14917 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDH17O14917 AC010153.1-201ENST00000432862 727 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.37□□□□□ -1.71
PCDH17O14917 LARP1BP3-201ENST00000437229 869 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDH17O14917 SDCBPP1-201ENST00000440192 890 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 TAF9P1-201ENST00000445421 515 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 AL590399.6-201ENST00000446396 307 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 AC005297.2-201ENST00000450430 606 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 HMGB1P15-201ENST00000453854 435 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 TAF9P2-201ENST00000454958 515 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 SNRPGP9-201ENST00000456025 225 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 SNRPFP4-201ENST00000456366 242 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDH17O14917 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDH17O14917 RPS20P24-201ENST00000457473 361 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDH17O14917 RN7SL817P-201ENST00000480777 288 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 AC068724.1-201ENST00000487100 792 ntBASIC4.37□□□□□ -1.71
PCDH17O14917 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDH17O14917 TXNP6-201ENST00000510190 310 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms