Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MTND1P33-201ENST00000446251 917 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 DNAJC19P8-201ENST00000452887 259 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 HMGB1P15-201ENST00000453854 435 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 MTND2P6-201ENST00000455337 1030 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 AC089999.1-201ENST00000460336 374 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 AC004801.2-202ENST00000463559 283 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 RPL23AP14-201ENST00000468281 468 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 TRBV12-2-201ENST00000489763 344 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 RNU6-202P-201ENST00000515998 96 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 SUMO2P20-201ENST00000520803 283 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 AC103843.2-201ENST00000530523 682 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 ZNF415P1-201ENST00000582279 1166 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 AC103881.1-201ENST00000603476 538 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 AL592295.2-201ENST00000612578 206 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 AL118556.2-201ENST00000614375 824 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 FRG1HP-204ENST00000617940 757 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 AC092628.2-201ENST00000622492 339 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 AC020923.1-201ENST00000624021 917 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 AP000553.6-201ENST00000641242 118 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 AC005183.1-201ENST00000603687 1979 ntBASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TM9SF3Q9HD45 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 RPL7P26-201ENST00000333817 754 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 RNA5SP235-201ENST00000365411 114 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 RNU6-629P-201ENST00000384061 103 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 RNU6-1151P-201ENST00000384684 107 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AL356057.1-202ENST00000402263 756 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 BX842559.1-201ENST00000419615 532 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AC002075.2-201ENST00000425207 252 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AC096632.1-201ENST00000427395 310 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AL034418.1-201ENST00000448675 860 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 SSXP4-201ENST00000451349 245 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 PTGES3P5-201ENST00000455109 434 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 BX248409.1-201ENST00000455497 255 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 NECAP1P2-201ENST00000455668 727 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 RPS4XP10-201ENST00000465034 731 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AC010285.1-201ENST00000470580 392 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 RPL32P34-201ENST00000486380 400 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 RN7SKP209-201ENST00000516888 304 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AC022069.1-201ENST00000582910 658 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 AL356118.1-201ENST00000635272 1078 ntBASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TM9SF3Q9HD45 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 RNU6-444P-201ENST00000383988 108 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 RN7SKP285-201ENST00000410137 318 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 RNU4-65P-201ENST00000410473 140 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 MTCO3P12-201ENST00000416718 547 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 ZFAND6P1-201ENST00000434138 605 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 MTCO3P43-201ENST00000440974 771 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 BTBD7P2-201ENST00000441962 620 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 HMGN3P1-201ENST00000453847 193 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 BX510359.1-201ENST00000456973 237 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 RN7SL601P-201ENST00000471221 293 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 HMGB1P22-201ENST00000505315 124 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AC026784.1-201ENST00000507986 352 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AC008011.1-201ENST00000545989 227 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms