Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU6-227P-201ENST00000362865 103 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 SNORA73B-201ENST00000363217 204 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 SNORD15A-201ENST00000384214 148 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 Y_RNA.568-201ENST00000384742 113 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 SNORA46.1-201ENST00000391069 153 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 MSRB1P1-201ENST00000396851 354 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 HSPA8P15-201ENST00000401676 786 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 RN7SKP39-201ENST00000410773 322 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU6-651P-201ENST00000411040 105 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 MTCO1P39-201ENST00000426148 480 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 CICP10-201ENST00000439497 198 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC008267.6-201ENST00000441664 139 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 CYCSP44-201ENST00000448560 313 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC013429.1-201ENST00000456604 422 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC023141.9-201ENST00000458734 412 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 RN7SL368P-201ENST00000473384 277 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC012123.2-201ENST00000485809 248 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 RN7SL184P-201ENST00000488308 297 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 RN7SL516P-201ENST00000496127 297 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 RN7SL143P-201ENST00000496780 297 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC006427.1-201ENST00000514359 712 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU6-927P-201ENST00000516199 100 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC087752.2-201ENST00000521219 281 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC008489.1-201ENST00000524271 483 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 HMGN1P26-201ENST00000558737 303 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 RN7SL697P-201ENST00000582484 299 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 MIR4470-201ENST00000583453 72 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC067852.5-201ENST00000589299 310 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 RPSAP66-201ENST00000592196 606 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AL352984.2-201ENST00000611153 546 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AL049539.1-201ENST00000611964 459 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC073349.3-201ENST00000617616 186 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 MIR4496-201ENST00000635896 61 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC124944.3-204ENST00000641191 150 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC073869.8-201ENST00000641806 335 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 LRRC37A12P-201ENST00000454917 1801 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 OLMALINC-203ENST00000641087 3779 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
KRTAP3-1Q9BYR8 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC3.53□□□□□ -1.85
KRTAP3-1Q9BYR8 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC3.53□□□□□ -1.85
KRTAP3-1Q9BYR8 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 CASC19-228ENST00000641414 1684 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC022325.1-201ENST00000502748 2199 ntBASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-1Q9BYR8 UBE2L2-201ENST00000254302 429 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms