Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC005632.1-201ENST00000550637 576 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AL135978.1-201ENST00000553618 1266 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 HP-207ENST00000562526 685 ntTSL 3 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AP007216.1-201ENST00000563932 385 ntTSL 3 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AC034105.5-201ENST00000564017 314 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 ULK4P3-202ENST00000565158 593 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AL513043.2-201ENST00000573941 143 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 RN7SL652P-201ENST00000577769 300 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 YWHAEP2-201ENST00000580066 112 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 YWHAEP3-201ENST00000582767 121 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AURKC-206ENST00000598785 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AC010615.2-204ENST00000600469 830 ntTSL 3 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AC123786.2-201ENST00000603459 275 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AC008013.3-201ENST00000605711 675 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AC025754.2-201ENST00000606491 432 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 MIR15A-201ENST00000607334 83 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 MIR6892-201ENST00000612346 115 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 SEPT14P17-201ENST00000617978 177 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 Metazoa_SRP.175-201ENST00000619837 250 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 ANKMY2-205ENST00000627859 210 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AC099654.15-201ENST00000639802 509 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AL512310.12-203ENST00000640543 90 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 CLDN2-202ENST00000540876 2919 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF565-203ENST00000392173 1931 ntAPPRIS P2 TSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 DDR1-AS1-206ENST00000458361 3994 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 CCNJL-208ENST00000541762 2965 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AL161722.3-201ENST00000605789 2983 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AL157831.2-201ENST00000564681 3095 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 HERC2P5-201ENST00000562687 3825 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AL591222.1-201ENST00000568063 3844 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AC058791.1-201ENST00000608412 3198 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 PXYLP1-204ENST00000504264 1773 ntTSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 CLUHP3-206ENST00000562354 4117 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 NUP85-210ENST00000579298 1890 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 SDAD1P1-202ENST00000524156 2051 ntBASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-4Q9BYR3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF438-207ENST00000452305 3344 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MAPK10-274ENST00000641120 2456 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 NAP1L3-202ENST00000475430 2555 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MLH1-221ENST00000536378 2567 ntTSL 2 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms