Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 USP9YP11-201ENST00000427537 717 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 USP9YP14-201ENST00000430663 563 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 AC092685.1-201ENST00000447960 1243 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 ART2BP-201ENST00000453501 499 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 TPTE2P5-203ENST00000458118 728 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 RPL7P48-201ENST00000461513 746 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 AC110794.1-201ENST00000505816 425 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 AC121161.1-201ENST00000510606 652 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 RNU6-276P-201ENST00000516114 96 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 AC068446.3-201ENST00000555285 382 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 AL360157.1-201ENST00000565962 87 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 PIGPP4-201ENST00000584447 307 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 AL022067.1-201ENST00000602426 454 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 AL160237.3-201ENST00000604114 1013 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 AP004372.1-201ENST00000604842 844 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 RNVU1-4-201ENST00000612985 164 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNED1Q8TER0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SNED1Q8TER0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SNED1Q8TER0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNED1Q8TER0 AC087190.4-201ENST00000574616 8334 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 AL390862.1-201ENST00000635467 1469 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 AC011155.1-201ENST00000316512 456 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 RNU4-47P-201ENST00000410876 114 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 HMGN1P24-201ENST00000412282 298 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 AC048351.1-201ENST00000420064 602 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 RPL23AP71-201ENST00000470966 469 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 AC004263.1-201ENST00000479327 332 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 RPS3AP43-201ENST00000479743 781 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 AC112518.2-201ENST00000508565 425 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 HMGB1P47-201ENST00000511281 589 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 AC108120.2-201ENST00000512973 294 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 SMARCE1P4-201ENST00000523647 241 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 AC034105.3-201ENST00000565294 442 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 AP000919.1-202ENST00000581139 1264 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.15□□□□□ -1.74
SNED1Q8TER0 AL732372.2-225ENST00000642124 456 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNED1Q8TER0 AL118496.1-201ENST00000440201 1812 ntBASIC4.15□□□□□ -1.74
SNED1Q8TER0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
SNED1Q8TER0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SNED1Q8TER0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNED1Q8TER0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.15□□□□□ -1.75
SNED1Q8TER0 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.15□□□□□ -1.75
SNED1Q8TER0 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.15□□□□□ -1.75
SNED1Q8TER0 MTND4P8-201ENST00000514997 1362 ntBASIC4.15□□□□□ -1.75
SNED1Q8TER0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.15□□□□□ -1.75
SNED1Q8TER0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNED1Q8TER0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNED1Q8TER0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNED1Q8TER0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 RNU6-666P-201ENST00000363499 107 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNED1Q8TER0 AL355615.1-201ENST00000406187 641 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 AC009518.2-201ENST00000418056 731 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 MTCO1P53-201ENST00000441633 699 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 AP002345.1-201ENST00000456493 928 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 RPS4XP2-201ENST00000458402 793 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms