Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SYNE4Q8N205 CASC19-284ENST00000642142 1868 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNE4Q8N205 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SYNE4Q8N205 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SYNE4Q8N205 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SYNE4Q8N205 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SYNE4Q8N205 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SYNE4Q8N205 RNU6-1339P-201ENST00000363574 91 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SYNE4Q8N205 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 MTCO1P3-201ENST00000429327 192 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 NANOGNBP1-201ENST00000448444 480 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 RPL36AP33-201ENST00000450395 310 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 AC108145.1-201ENST00000503770 153 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 RNU6-718P-201ENST00000516166 105 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 AP004247.1-201ENST00000531556 1289 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SYNE4Q8N205 MIR4719-201ENST00000585233 84 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 SRGNP1-201ENST00000603392 451 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 AC023158.2-201ENST00000614876 543 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 AL122125.1-201ENST00000616999 600 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 EOGT-210ENST00000615922 1931 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SYNE4Q8N205 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SYNE4Q8N205 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.16□□□□□ -1.58
SYNE4Q8N205 RLIMP2-201ENST00000427891 1563 ntBASIC5.16□□□□□ -1.58
SYNE4Q8N205 AL161912.2-201ENST00000565707 3007 ntBASIC5.15□□□□□ -1.58
SYNE4Q8N205 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE4Q8N205 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE4Q8N205 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.15□□□□□ -1.58
SYNE4Q8N205 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE4Q8N205 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE4Q8N205 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.15□□□□□ -1.58
SYNE4Q8N205 OR4G2P-201ENST00000328113 903 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 RNA5SP119-201ENST00000362715 117 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 RNU6-348P-201ENST00000384386 107 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 MIR1303-201ENST00000408625 86 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC007435.1-201ENST00000421086 415 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 Z99497.1-201ENST00000421282 135 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AL358472.1-201ENST00000431295 329 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 ELOCP10-201ENST00000440624 327 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 AL031584.1-201ENST00000447169 754 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 RPS11P1-201ENST00000451072 473 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE4Q8N205 SNORA74D-201ENST00000516404 141 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 RNU6-352P-201ENST00000516908 107 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC090151.1-201ENST00000520784 730 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 SMARCE1P4-201ENST00000523647 241 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AP001207.1-201ENST00000524051 481 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC124293.1-201ENST00000530034 493 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 OR4C2P-201ENST00000530855 1064 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 CYCSP28-201ENST00000534284 321 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 POLR2KP1-201ENST00000553226 168 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 NIFKP8-201ENST00000560500 874 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC110743.1-201ENST00000584870 478 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 ELOCP34-201ENST00000604436 327 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AL592221.1-201ENST00000605266 382 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 MIR6868-201ENST00000611215 58 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SYNE4Q8N205 AL357559.1-201ENST00000622228 274 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AL354798.1-201ENST00000622505 329 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC095031.1-201ENST00000623685 672 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 DCAF13P3-201ENST00000561147 1334 ntBASIC5.15□□□□□ -1.59
SYNE4Q8N205 AC109315.1-201ENST00000584143 1347 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms