Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNA5SP345-201ENST00000410646 108 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 RNU4-6P-201ENST00000410804 122 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 BX276092.6-201ENST00000430476 250 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 OR4K11P-201ENST00000431829 904 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 BX276092.8-201ENST00000455722 250 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AP1S2P1-201ENST00000457344 379 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 RPS23P6-201ENST00000466136 431 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC126389.1-201ENST00000477436 290 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 ATP5LP5-201ENST00000483050 299 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AP001025.2-201ENST00000490908 477 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 VN1R104P-201ENST00000505115 1009 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 Y_RNA.680-201ENST00000516441 93 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 Y_RNA.721-201ENST00000517207 102 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 RNA5SP454-201ENST00000517231 127 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC022360.1-201ENST00000521058 340 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC022882.1-201ENST00000532142 501 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 OR4K8P-201ENST00000578842 1048 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 MIR4311-201ENST00000580794 100 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 RN7SL544P-201ENST00000617232 284 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 RN7SL763P-201ENST00000620922 284 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC025125.1-201ENST00000624743 1922 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 KPNA2P2-201ENST00000419546 1489 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 ZNF734P-201ENST00000419494 1534 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC083899.1-201ENST00000454465 3819 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 Y_RNA.463-201ENST00000384271 102 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 RNU6-1151P-201ENST00000384684 107 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 MIR320B1-201ENST00000390209 79 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 RNU6-1109P-201ENST00000391187 107 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 Y_RNA.645-201ENST00000391229 102 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 RNU6-903P-201ENST00000391270 109 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AL139397.2-201ENST00000404529 772 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 RNA5SP178-201ENST00000410380 128 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 RNU6-954P-201ENST00000411355 107 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 BRWD1P3-201ENST00000428816 390 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 HMGB3P24-201ENST00000433260 622 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC138761.5-201ENST00000433967 325 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC012075.1-201ENST00000436549 580 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 LINC02210-201ENST00000444561 288 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AL596266.1-201ENST00000448132 400 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AL445665.1-202ENST00000452436 324 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 RN7SL717P-201ENST00000478343 297 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 RPL7P43-201ENST00000478876 753 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC079140.5-201ENST00000507882 310 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC002456.2-201ENST00000509356 380 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 RNY3P15-201ENST00000516297 97 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AF279873.1-201ENST00000523393 313 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 PMS2P3-207ENST00000529061 717 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 HMGB1P42-201ENST00000532126 553 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC122688.1-201ENST00000541494 223 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC079600.1-201ENST00000550326 297 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC020634.1-201ENST00000608701 549 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 RNA5SP440-201ENST00000612665 119 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms