Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 HMGB3P11-201ENST00000440127 604 ntBASIC2.18□□□□□ -2.06
CSMD2Q7Z408 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.18□□□□□ -2.06
CSMD2Q7Z408 HMGB1P16-201ENST00000447155 540 ntBASIC2.18□□□□□ -2.06
CSMD2Q7Z408 RN7SKP24-201ENST00000515888 284 ntBASIC2.18□□□□□ -2.06
CSMD2Q7Z408 AC090695.1-201ENST00000561269 1222 ntBASIC2.18□□□□□ -2.06
CSMD2Q7Z408 AC010480.1-201ENST00000624823 684 ntBASIC2.18□□□□□ -2.06
CSMD2Q7Z408 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.18□□□□□ -2.06
CSMD2Q7Z408 FAM35BP-202ENST00000497389 3337 ntBASIC2.18□□□□□ -2.06
CSMD2Q7Z408 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 NDUFA5P4-201ENST00000436704 385 ntBASIC2.17□□□□□ -2.06
CSMD2Q7Z408 SNRPGP9-201ENST00000456025 225 ntBASIC2.17□□□□□ -2.06
CSMD2Q7Z408 snoU13.18-201ENST00000459483 104 ntBASIC2.17□□□□□ -2.06
CSMD2Q7Z408 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 RNU6-253P-201ENST00000384730 105 ntBASIC2.17□□□□□ -2.06
CSMD2Q7Z408 NPM1P38-201ENST00000403835 865 ntBASIC2.17□□□□□ -2.06
CSMD2Q7Z408 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 AC011816.1-201ENST00000441346 546 ntBASIC2.17□□□□□ -2.06
CSMD2Q7Z408 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 RMST_8.1-201ENST00000610287 165 ntBASIC2.17□□□□□ -2.06
CSMD2Q7Z408 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD2Q7Z408 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.16□□□□□ -2.06
CSMD2Q7Z408 RPL21P75-201ENST00000396599 483 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 RPL21P1-201ENST00000399532 476 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 RPL21P28-201ENST00000401418 483 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 AL592114.1-201ENST00000403842 483 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 RN7SKP58-201ENST00000411010 305 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 FAR1P1-201ENST00000427163 934 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.16□□□□□ -2.06
CSMD2Q7Z408 RPL30P9-201ENST00000465586 330 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 ST13P14-201ENST00000474095 734 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 RPL21P16-201ENST00000495531 483 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 AC034244.2-201ENST00000514668 858 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 RN7SKP282-201ENST00000516824 299 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 CKS1BP1-201ENST00000555221 240 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD2Q7Z408 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CSMD2Q7Z408 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD2Q7Z408 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.16□□□□□ -2.06
CSMD2Q7Z408 CYCSP49-201ENST00000420810 319 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.16□□□□□ -2.06
CSMD2Q7Z408 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.16□□□□□ -2.06
CSMD2Q7Z408 AL355493.4-201ENST00000618530 292 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.16□□□□□ -2.06
CSMD2Q7Z408 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
CSMD2Q7Z408 AL356292.1-201ENST00000283110 373 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 RN7SKP44-201ENST00000363602 316 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 SNORA25.9-201ENST00000365087 128 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 MIR518E-201ENST00000385252 88 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 RNU6-55P-201ENST00000411092 107 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 RNU6-954P-201ENST00000411355 107 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.16□□□□□ -2.06
CSMD2Q7Z408 AC108471.1-201ENST00000513977 287 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 AC007423.1-201ENST00000605009 627 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 SNORA35B-201ENST00000607417 129 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 AC006111.3-201ENST00000622137 383 ntBASIC2.16□□□□□ -2.06
CSMD2Q7Z408 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD2Q7Z408 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CSMD2Q7Z408 MORF4L1P6-201ENST00000418771 268 ntBASIC2.15□□□□□ -2.06
CSMD2Q7Z408 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.15□□□□□ -2.06
CSMD2Q7Z408 OR6K1P-201ENST00000456766 971 ntBASIC2.15□□□□□ -2.06
CSMD2Q7Z408 AC106872.3-201ENST00000495104 446 ntBASIC2.15□□□□□ -2.06
CSMD2Q7Z408 SNORA31.1-201ENST00000515993 133 ntBASIC2.15□□□□□ -2.06
CSMD2Q7Z408 SNORA31.5-201ENST00000516190 133 ntBASIC2.15□□□□□ -2.06
CSMD2Q7Z408 OR5AK3P-201ENST00000527486 1297 ntBASIC2.15□□□□□ -2.06
CSMD2Q7Z408 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.15□□□□□ -2.06
CSMD2Q7Z408 RANP3-201ENST00000530970 276 ntBASIC2.15□□□□□ -2.06
CSMD2Q7Z408 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.15□□□□□ -2.06
CSMD2Q7Z408 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC2.15□□□□□ -2.06
CSMD2Q7Z408 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.15□□□□□ -2.06
CSMD2Q7Z408 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
CSMD2Q7Z408 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.15□□□□□ -2.06
CSMD2Q7Z408 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CSMD2Q7Z408 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CSMD2Q7Z408 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
CSMD2Q7Z408 OR10AB1P-202ENST00000641219 1686 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms