Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 RPL23AP15-201ENST00000450202 459 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC009063.1-201ENST00000563342 702 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC012603.1-201ENST00000606424 528 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 MIR93-201ENST00000385024 80 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 RNU11-201ENST00000387069 134 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 BOLA3P3-201ENST00000505182 232 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC036111.3-201ENST00000526389 112 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AL360012.1-201ENST00000602813 131 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC103810.6-201ENST00000606708 136 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 UBE3AP2-201ENST00000429033 2259 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 Z95114.1-201ENST00000624264 14574 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 RPL37P4-201ENST00000448908 268 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 RPL23AP35-201ENST00000451906 501 ntBASIC1.64□□□□□ -2.15
UBR4Q5T4S7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC1.64□□□□□ -2.15
UBR4Q5T4S7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AC092881.1-201ENST00000638218 2733 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 RNU6-253P-201ENST00000384730 105 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AC112653.1-201ENST00000443851 386 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 RN7SKP116-201ENST00000516902 319 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 RNU6-356P-201ENST00000384140 107 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 MIR9-1-201ENST00000385198 89 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 RPL7P8-201ENST00000411964 730 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 RANP7-201ENST00000418085 644 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 SKP1P3-201ENST00000429280 487 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AC092013.1-201ENST00000438795 332 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 ATP5EP1-201ENST00000510257 156 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AC020914.4-201ENST00000597690 277 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AC091905.1-201ENST00000624400 311 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AL137003.2-201ENST00000606924 2538 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 Y_RNA.132-201ENST00000363421 102 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 SNORD114-22-201ENST00000365423 72 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 RNY3-201ENST00000365484 102 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AL358178.1-201ENST00000407698 397 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 HMGB3P20-201ENST00000417997 600 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AC087499.2-201ENST00000432861 149 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 RN7SL585P-201ENST00000470538 280 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 SUMO2P20-201ENST00000520803 283 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AC079228.1-201ENST00000624774 1049 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AC123912.3-201ENST00000600907 1367 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 RNA5SP21-201ENST00000410917 96 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 DUTP6-201ENST00000425573 462 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AL445528.1-201ENST00000426330 420 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 GEMIN8P3-201ENST00000445417 720 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 RN7SL594P-201ENST00000470590 287 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AL121821.2-201ENST00000556081 394 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.63□□□□□ -2.15
UBR4Q5T4S7 AC010546.1-201ENST00000569391 485 ntBASIC1.63□□□□□ -2.15
UBR4Q5T4S7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms