Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.84□□□□□ -1.79
COL16A1Q07092 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
COL16A1Q07092 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL16A1Q07092 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
COL16A1Q07092 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
COL16A1Q07092 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.84□□□□□ -1.8
COL16A1Q07092 AL590623.1-201ENST00000427864 105 ntBASIC3.84□□□□□ -1.8
COL16A1Q07092 RPL17P35-201ENST00000432217 549 ntBASIC3.84□□□□□ -1.8
COL16A1Q07092 AL590103.1-201ENST00000434488 307 ntBASIC3.84□□□□□ -1.8
COL16A1Q07092 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.84□□□□□ -1.8
COL16A1Q07092 RPL29P29-201ENST00000448725 423 ntBASIC3.84□□□□□ -1.8
COL16A1Q07092 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.84□□□□□ -1.8
COL16A1Q07092 RNA5SP458-201ENST00000516188 119 ntBASIC3.84□□□□□ -1.8
COL16A1Q07092 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.84□□□□□ -1.8
COL16A1Q07092 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.84□□□□□ -1.8
COL16A1Q07092 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.84□□□□□ -1.8
COL16A1Q07092 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.84□□□□□ -1.8
COL16A1Q07092 BNIP3P27-201ENST00000599991 412 ntBASIC3.84□□□□□ -1.8
COL16A1Q07092 AC068313.1-201ENST00000604028 1008 ntBASIC3.84□□□□□ -1.8
COL16A1Q07092 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL16A1Q07092 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL16A1Q07092 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL16A1Q07092 RPS3AP26-201ENST00000398259 784 ntBASIC3.83□□□□□ -1.8
COL16A1Q07092 DHFRP5-201ENST00000406944 564 ntBASIC3.83□□□□□ -1.8
COL16A1Q07092 MTND4P11-201ENST00000417020 1058 ntBASIC3.83□□□□□ -1.8
COL16A1Q07092 AL139415.2-201ENST00000431968 163 ntBASIC3.83□□□□□ -1.8
COL16A1Q07092 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.83□□□□□ -1.8
COL16A1Q07092 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.83□□□□□ -1.8
COL16A1Q07092 MTCO3P16-201ENST00000454456 754 ntBASIC3.83□□□□□ -1.8
COL16A1Q07092 AC010468.1-201ENST00000461022 817 ntBASIC3.83□□□□□ -1.8
COL16A1Q07092 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.83□□□□□ -1.8
COL16A1Q07092 CCNHP1-201ENST00000513311 678 ntBASIC3.83□□□□□ -1.8
COL16A1Q07092 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.83□□□□□ -1.8
COL16A1Q07092 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.83□□□□□ -1.8
COL16A1Q07092 AC009712.1-201ENST00000564938 316 ntBASIC3.83□□□□□ -1.8
COL16A1Q07092 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL16A1Q07092 MIR4648-201ENST00000580107 72 ntBASIC3.83□□□□□ -1.8
COL16A1Q07092 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.83□□□□□ -1.8
COL16A1Q07092 AP003117.1-201ENST00000602771 554 ntBASIC3.83□□□□□ -1.8
COL16A1Q07092 AL356490.1-201ENST00000623079 479 ntBASIC3.83□□□□□ -1.8
COL16A1Q07092 CTSLP2-204ENST00000629029 392 ntBASIC3.83□□□□□ -1.8
COL16A1Q07092 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL16A1Q07092 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL16A1Q07092 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL16A1Q07092 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.83□□□□□ -1.8
COL16A1Q07092 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL16A1Q07092 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
COL16A1Q07092 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
COL16A1Q07092 Y_RNA.226-201ENST00000364337 114 ntBASIC3.82□□□□□ -1.8
COL16A1Q07092 RNA5SP425-201ENST00000410336 112 ntBASIC3.82□□□□□ -1.8
COL16A1Q07092 RNU6-564P-201ENST00000410983 104 ntBASIC3.82□□□□□ -1.8
COL16A1Q07092 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.82□□□□□ -1.8
COL16A1Q07092 MTCO1P51-201ENST00000427672 1060 ntBASIC3.82□□□□□ -1.8
COL16A1Q07092 MTCO3P43-201ENST00000440974 771 ntBASIC3.82□□□□□ -1.8
COL16A1Q07092 AC073587.1-201ENST00000447093 876 ntBASIC3.82□□□□□ -1.8
COL16A1Q07092 TPT1P8-201ENST00000510120 555 ntBASIC3.82□□□□□ -1.8
COL16A1Q07092 RNU6-548P-201ENST00000517083 115 ntBASIC3.82□□□□□ -1.8
COL16A1Q07092 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.82□□□□□ -1.8
COL16A1Q07092 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.82□□□□□ -1.8
COL16A1Q07092 AC022306.3-201ENST00000619930 550 ntBASIC3.82□□□□□ -1.8
COL16A1Q07092 AC103858.2-201ENST00000621471 543 ntBASIC3.82□□□□□ -1.8
COL16A1Q07092 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.82□□□□□ -1.8
COL16A1Q07092 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.82□□□□□ -1.8
COL16A1Q07092 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.82□□□□□ -1.8
COL16A1Q07092 MTND4P21-201ENST00000453886 1357 ntBASIC3.82□□□□□ -1.8
COL16A1Q07092 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL16A1Q07092 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL16A1Q07092 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL16A1Q07092 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL16A1Q07092 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL16A1Q07092 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL16A1Q07092 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.82□□□□□ -1.8
COL16A1Q07092 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL16A1Q07092 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL16A1Q07092 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL16A1Q07092 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COL16A1Q07092 AL356057.3-201ENST00000402607 340 ntBASIC3.81□□□□□ -1.8
COL16A1Q07092 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.81□□□□□ -1.8
COL16A1Q07092 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL16A1Q07092 SFR1P2-201ENST00000421841 730 ntBASIC3.81□□□□□ -1.8
COL16A1Q07092 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.81□□□□□ -1.8
COL16A1Q07092 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.81□□□□□ -1.8
COL16A1Q07092 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.81□□□□□ -1.8
COL16A1Q07092 HMGB1P19-201ENST00000517578 577 ntBASIC3.81□□□□□ -1.8
COL16A1Q07092 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL16A1Q07092 AC010680.4-201ENST00000605334 543 ntBASIC3.81□□□□□ -1.8
COL16A1Q07092 AL122125.1-201ENST00000616999 600 ntBASIC3.81□□□□□ -1.8
COL16A1Q07092 AC022960.3-201ENST00000619794 441 ntBASIC3.81□□□□□ -1.8
COL16A1Q07092 AC023510.2-201ENST00000622162 746 ntBASIC3.81□□□□□ -1.8
COL16A1Q07092 AC025034.2-201ENST00000623264 286 ntBASIC3.81□□□□□ -1.8
COL16A1Q07092 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.81□□□□□ -1.8
COL16A1Q07092 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.81□□□□□ -1.8
COL16A1Q07092 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.81□□□□□ -1.8
COL16A1Q07092 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COL16A1Q07092 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL16A1Q07092 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL16A1Q07092 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
COL16A1Q07092 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COL16A1Q07092 RNA5SP99-201ENST00000364020 114 ntBASIC3.81□□□□□ -1.8
COL16A1Q07092 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms