Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.94□□□□□ -1.62
IRF9Q00978 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.94□□□□□ -1.62
IRF9Q00978 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.94□□□□□ -1.62
IRF9Q00978 AC005730.3-201ENST00000583067 366 ntBASIC4.94□□□□□ -1.62
IRF9Q00978 RN7SL435P-201ENST00000584418 282 ntBASIC4.94□□□□□ -1.62
IRF9Q00978 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.94□□□□□ -1.62
IRF9Q00978 AC007566.2-201ENST00000603642 413 ntBASIC4.94□□□□□ -1.62
IRF9Q00978 AL391813.2-201ENST00000609113 322 ntBASIC4.94□□□□□ -1.62
IRF9Q00978 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.94□□□□□ -1.62
IRF9Q00978 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
IRF9Q00978 AL020991.1-201ENST00000612314 373 ntBASIC4.94□□□□□ -1.62
IRF9Q00978 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.94□□□□□ -1.62
IRF9Q00978 AC104985.2-201ENST00000620598 500 ntBASIC4.94□□□□□ -1.62
IRF9Q00978 AC015871.5-202ENST00000623252 701 ntBASIC4.94□□□□□ -1.62
IRF9Q00978 AC079597.1-201ENST00000624306 508 ntBASIC4.94□□□□□ -1.62
IRF9Q00978 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.94□□□□□ -1.62
IRF9Q00978 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
IRF9Q00978 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
IRF9Q00978 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
IRF9Q00978 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
IRF9Q00978 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
IRF9Q00978 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.94□□□□□ -1.62
IRF9Q00978 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
IRF9Q00978 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
IRF9Q00978 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.93□□□□□ -1.62
IRF9Q00978 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
IRF9Q00978 SMG1P4-204ENST00000523028 4131 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.93□□□□□ -1.62
IRF9Q00978 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.93□□□□□ -1.62
IRF9Q00978 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
IRF9Q00978 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
IRF9Q00978 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.93□□□□□ -1.62
IRF9Q00978 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.93□□□□□ -1.62
IRF9Q00978 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
IRF9Q00978 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
IRF9Q00978 Y_RNA.70-201ENST00000362886 110 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 RNU6-797P-201ENST00000363101 109 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 Y_RNA.159-201ENST00000363674 87 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 RN7SKP160-201ENST00000363804 340 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 RNU4-1-201ENST00000363925 141 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 UBBP2-201ENST00000376781 231 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 RN7SKP235-201ENST00000410662 305 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 USP12PX-201ENST00000432383 1057 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 AC119618.1-201ENST00000434191 222 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 RPL12P46-201ENST00000436610 195 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 AC114495.1-201ENST00000441274 436 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 AC092647.2-201ENST00000452998 253 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
IRF9Q00978 AC041039.1-201ENST00000485656 536 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
IRF9Q00978 AC107934.1-201ENST00000522215 217 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.93□□□□□ -1.62
IRF9Q00978 AC090022.1-201ENST00000546569 311 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
IRF9Q00978 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.93□□□□□ -1.62
IRF9Q00978 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.93□□□□□ -1.62
IRF9Q00978 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.93□□□□□ -1.62
IRF9Q00978 MIR3936-201ENST00000584304 110 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 UBE2L4-201ENST00000587688 464 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.93□□□□□ -1.62
IRF9Q00978 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.93□□□□□ -1.62
IRF9Q00978 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.93□□□□□ -1.62
IRF9Q00978 AP001330.5-201ENST00000607176 411 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.93□□□□□ -1.62
IRF9Q00978 AL158801.5-201ENST00000623123 465 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.93□□□□□ -1.62
IRF9Q00978 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
IRF9Q00978 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.93□□□□□ -1.62
IRF9Q00978 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
IRF9Q00978 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
IRF9Q00978 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.93□□□□□ -1.62
IRF9Q00978 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
IRF9Q00978 ZNF652P1-201ENST00000442420 1309 ntBASIC4.93□□□□□ -1.62
IRF9Q00978 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.92□□□□□ -1.62
IRF9Q00978 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
IRF9Q00978 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.92□□□□□ -1.62
IRF9Q00978 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.92□□□□□ -1.62
IRF9Q00978 AC114546.3-201ENST00000623582 1734 ntBASIC4.92□□□□□ -1.62
IRF9Q00978 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
IRF9Q00978 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
IRF9Q00978 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
IRF9Q00978 AL731566.1-201ENST00000620490 1937 ntBASIC4.92□□□□□ -1.62
IRF9Q00978 RNU6-359P-201ENST00000365466 108 ntBASIC4.92□□□□□ -1.62
IRF9Q00978 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
IRF9Q00978 RNU6-877P-201ENST00000383868 107 ntBASIC4.92□□□□□ -1.62
IRF9Q00978 SNORA20.2-201ENST00000383922 131 ntBASIC4.92□□□□□ -1.62
IRF9Q00978 Y_RNA.481-201ENST00000384373 102 ntBASIC4.92□□□□□ -1.62
IRF9Q00978 MT-TL1-201ENST00000386347 75 ntBASIC4.92□□□□□ -1.62
IRF9Q00978 U3.20-201ENST00000390909 217 ntBASIC4.92□□□□□ -1.62
IRF9Q00978 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.92□□□□□ -1.62
IRF9Q00978 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.92□□□□□ -1.62
IRF9Q00978 RNU2-15P-201ENST00000410692 191 ntBASIC4.92□□□□□ -1.62
IRF9Q00978 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.92□□□□□ -1.62
IRF9Q00978 AMD1P2-201ENST00000412936 992 ntBASIC4.92□□□□□ -1.62
IRF9Q00978 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.92□□□□□ -1.62
IRF9Q00978 AL353193.1-201ENST00000421444 268 ntBASIC4.92□□□□□ -1.62
IRF9Q00978 RPL30P3-201ENST00000424262 333 ntBASIC4.92□□□□□ -1.62
IRF9Q00978 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.92□□□□□ -1.62
IRF9Q00978 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.92□□□□□ -1.62
IRF9Q00978 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms