Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ARL4AP3-201ENST00000441452 574 ntBASIC1.24□□□□□ -2.21
USH2AO75445 RPS12P18-201ENST00000442381 270 ntBASIC1.24□□□□□ -2.21
USH2AO75445 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.24□□□□□ -2.21
USH2AO75445 AC087385.1-201ENST00000475062 312 ntBASIC1.24□□□□□ -2.21
USH2AO75445 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC1.24□□□□□ -2.21
USH2AO75445 TRMT112P2-201ENST00000512910 132 ntBASIC1.24□□□□□ -2.21
USH2AO75445 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC1.24□□□□□ -2.21
USH2AO75445 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC1.24□□□□□ -2.21
USH2AO75445 MIR3936-201ENST00000584304 110 ntBASIC1.24□□□□□ -2.21
USH2AO75445 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.24□□□□□ -2.21
USH2AO75445 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 AL139039.1-201ENST00000401900 692 ntBASIC1.24□□□□□ -2.21
USH2AO75445 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.24□□□□□ -2.21
USH2AO75445 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.24□□□□□ -2.21
USH2AO75445 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC1.24□□□□□ -2.21
USH2AO75445 RN7SL636P-201ENST00000497504 294 ntBASIC1.24□□□□□ -2.21
USH2AO75445 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC1.24□□□□□ -2.21
USH2AO75445 EIF1P6-201ENST00000600054 334 ntBASIC1.24□□□□□ -2.21
USH2AO75445 AL136981.2-201ENST00000617319 734 ntBASIC1.24□□□□□ -2.21
USH2AO75445 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC1.24□□□□□ -2.21
USH2AO75445 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 FGF7P8-201ENST00000402994 292 ntBASIC1.23□□□□□ -2.21
USH2AO75445 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC1.23□□□□□ -2.21
USH2AO75445 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC1.23□□□□□ -2.21
USH2AO75445 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
USH2AO75445 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
USH2AO75445 AC007938.3-201ENST00000604965 623 ntBASIC1.23□□□□□ -2.21
USH2AO75445 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.23□□□□□ -2.21
USH2AO75445 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
USH2AO75445 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC1.23□□□□□ -2.21
USH2AO75445 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC1.23□□□□□ -2.21
USH2AO75445 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
USH2AO75445 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
USH2AO75445 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC1.23□□□□□ -2.21
USH2AO75445 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC1.23□□□□□ -2.21
USH2AO75445 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.23□□□□□ -2.21
USH2AO75445 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
USH2AO75445 HMGN2P8-201ENST00000391458 268 ntBASIC1.23□□□□□ -2.21
USH2AO75445 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
USH2AO75445 RNA5SP39-201ENST00000411245 120 ntBASIC1.23□□□□□ -2.21
USH2AO75445 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.23□□□□□ -2.21
USH2AO75445 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.23□□□□□ -2.21
USH2AO75445 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC1.23□□□□□ -2.21
USH2AO75445 RPS6P2-201ENST00000454208 705 ntBASIC1.23□□□□□ -2.21
USH2AO75445 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.23□□□□□ -2.21
USH2AO75445 OR5BN1P-201ENST00000532955 829 ntBASIC1.23□□□□□ -2.21
USH2AO75445 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC1.23□□□□□ -2.21
USH2AO75445 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.23□□□□□ -2.21
USH2AO75445 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC1.23□□□□□ -2.21
USH2AO75445 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC1.23□□□□□ -2.21
USH2AO75445 NRBF2P1-201ENST00000587407 859 ntBASIC1.23□□□□□ -2.21
USH2AO75445 AL356321.1-201ENST00000621360 228 ntBASIC1.23□□□□□ -2.21
USH2AO75445 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.23□□□□□ -2.21
USH2AO75445 AC093536.2-201ENST00000565257 1406 ntBASIC1.23□□□□□ -2.21
USH2AO75445 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.23□□□□□ -2.21
USH2AO75445 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
USH2AO75445 HMGB1P10-201ENST00000395823 563 ntBASIC1.23□□□□□ -2.21
USH2AO75445 AL590290.1-201ENST00000405336 380 ntBASIC1.23□□□□□ -2.21
USH2AO75445 AC133473.1-201ENST00000455173 299 ntBASIC1.23□□□□□ -2.21
USH2AO75445 HMGB3P14-201ENST00000494195 599 ntBASIC1.23□□□□□ -2.21
USH2AO75445 RN7SKP96-201ENST00000516948 297 ntBASIC1.23□□□□□ -2.21
USH2AO75445 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
USH2AO75445 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC1.23□□□□□ -2.21
USH2AO75445 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
USH2AO75445 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
USH2AO75445 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
USH2AO75445 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
USH2AO75445 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
USH2AO75445 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
USH2AO75445 AC104297.1-201ENST00000393779 870 ntBASIC1.23□□□□□ -2.21
USH2AO75445 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.23□□□□□ -2.21
USH2AO75445 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
USH2AO75445 AC096638.1-201ENST00000444678 216 ntBASIC1.23□□□□□ -2.21
USH2AO75445 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.23□□□□□ -2.21
USH2AO75445 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC1.23□□□□□ -2.21
USH2AO75445 OR5G4P-201ENST00000525251 760 ntBASIC1.23□□□□□ -2.21
USH2AO75445 OR5AP1P-201ENST00000529730 940 ntBASIC1.23□□□□□ -2.21
USH2AO75445 GNAI2P1-201ENST00000541815 315 ntBASIC1.23□□□□□ -2.21
USH2AO75445 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC1.23□□□□□ -2.21
USH2AO75445 PSMA3P-201ENST00000555485 635 ntBASIC1.23□□□□□ -2.21
USH2AO75445 AL109741.3-201ENST00000561748 592 ntBASIC1.23□□□□□ -2.21
USH2AO75445 MIR5047-201ENST00000579212 100 ntBASIC1.23□□□□□ -2.21
USH2AO75445 SNORA4-201ENST00000584302 138 ntBASIC1.23□□□□□ -2.21
USH2AO75445 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC1.23□□□□□ -2.21
USH2AO75445 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.23□□□□□ -2.21
USH2AO75445 MFSD8-245ENST00000641743 948 ntBASIC1.23□□□□□ -2.21
USH2AO75445 AL031595.2-201ENST00000624215 19071 ntBASIC1.23□□□□□ -2.21
USH2AO75445 USP33-201ENST00000357428 4155 ntTSL 5 BASIC1.23□□□□□ -2.21
USH2AO75445 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
USH2AO75445 AC096644.4-201ENST00000563417 2912 ntBASIC1.23□□□□□ -2.21
USH2AO75445 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC1.23□□□□□ -2.21
USH2AO75445 RNY1P10-201ENST00000363268 113 ntBASIC1.22□□□□□ -2.21
USH2AO75445 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
USH2AO75445 AL135786.1-201ENST00000415892 214 ntBASIC1.22□□□□□ -2.21
USH2AO75445 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC1.22□□□□□ -2.21
USH2AO75445 MRPS31P2-201ENST00000451581 518 ntBASIC1.22□□□□□ -2.21
USH2AO75445 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
USH2AO75445 AC234781.5-201ENST00000508429 271 ntBASIC1.22□□□□□ -2.21
USH2AO75445 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms