Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN2BO60939 snoU13.24-201ENST00000458998 104 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 HMGN2P13-201ENST00000476476 274 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN2BO60939 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN2BO60939 AC092185.1-201ENST00000491371 97 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 AC093663.1-201ENST00000497190 394 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 HMGB1P22-201ENST00000505315 124 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 SAP18P1-201ENST00000512058 390 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN2BO60939 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCN2BO60939 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN2BO60939 AC034105.4-201ENST00000568304 277 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 MIR4504-201ENST00000577413 92 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
SCN2BO60939 AC090312.2-201ENST00000582687 378 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 AP001029.3-201ENST00000588063 596 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 AC022387.2-201ENST00000604050 448 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 AC073111.2-201ENST00000605657 1075 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.12□□□□□ -1.91
SCN2BO60939 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.12□□□□□ -1.91
SCN2BO60939 AC012442.3-202ENST00000636742 206 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 AC244258.1-201ENST00000637553 1071 ntBASIC3.12□□□□□ -1.91
SCN2BO60939 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.12□□□□□ -1.91
SCN2BO60939 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SCN2BO60939 AL161912.2-201ENST00000565707 3007 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SCN2BO60939 AC004972.1-201ENST00000623934 2209 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCN2BO60939 RNU6-1243P-201ENST00000364028 107 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.11□□□□□ -1.91
SCN2BO60939 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.11□□□□□ -1.91
SCN2BO60939 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.11□□□□□ -1.91
SCN2BO60939 Z99127.3-201ENST00000448158 395 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 HMGB1P15-201ENST00000453854 435 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 AC104308.1-201ENST00000454621 333 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 AC090543.1-201ENST00000492168 485 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.11□□□□□ -1.91
SCN2BO60939 OR5H3P-201ENST00000502817 919 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.11□□□□□ -1.91
SCN2BO60939 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.11□□□□□ -1.91
SCN2BO60939 RN7SKP116-201ENST00000516902 319 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.11□□□□□ -1.91
SCN2BO60939 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.11□□□□□ -1.91
SCN2BO60939 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SCN2BO60939 OR5B10P-201ENST00000532869 642 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCN2BO60939 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.11□□□□□ -1.91
SCN2BO60939 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.11□□□□□ -1.91
SCN2BO60939 AL442163.2-201ENST00000553912 710 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.11□□□□□ -1.91
SCN2BO60939 AC107954.1-201ENST00000565906 727 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 AC015917.1-201ENST00000579654 510 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 MIR3922-201ENST00000585192 84 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.11□□□□□ -1.91
SCN2BO60939 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN2BO60939 AC034229.5-201ENST00000624258 185 ntBASIC3.11□□□□□ -1.91
SCN2BO60939 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN2BO60939 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SCN2BO60939 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
SCN2BO60939 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.1□□□□□ -1.91
SCN2BO60939 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCN2BO60939 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SCN2BO60939 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCN2BO60939 SAR1AP2-201ENST00000392696 594 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SCN2BO60939 AC006960.1-201ENST00000419980 153 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 RPL21P40-201ENST00000428586 483 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.1□□□□□ -1.91
SCN2BO60939 RPS7P2-201ENST00000435134 607 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 CST9LP2-201ENST00000437612 320 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 FTH1P1-201ENST00000437933 532 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.1□□□□□ -1.91
SCN2BO60939 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.1□□□□□ -1.91
SCN2BO60939 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.1□□□□□ -1.91
SCN2BO60939 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SCN2BO60939 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.1□□□□□ -1.91
SCN2BO60939 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.1□□□□□ -1.91
SCN2BO60939 AP001207.2-201ENST00000519490 539 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 HMGB1P46-201ENST00000520062 610 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 AC245166.1-201ENST00000521012 253 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.1□□□□□ -1.91
SCN2BO60939 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.1□□□□□ -1.91
SCN2BO60939 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.1□□□□□ -1.91
SCN2BO60939 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.1□□□□□ -1.91
SCN2BO60939 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.1□□□□□ -1.91
SCN2BO60939 AC005951.1-201ENST00000576706 485 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.1□□□□□ -1.91
SCN2BO60939 AL133393.1-201ENST00000603277 287 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 U3.45-201ENST00000607547 219 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCN2BO60939 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.1□□□□□ -1.91
SCN2BO60939 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.1□□□□□ -1.91
SCN2BO60939 AL392088.2-201ENST00000637607 285 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.1□□□□□ -1.91
SCN2BO60939 ELL2P4-201ENST00000446870 1376 ntBASIC3.1□□□□□ -1.91
SCN2BO60939 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.09□□□□□ -1.91
SCN2BO60939 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms