Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC7.15□□□□□ -1.26
HPS5Q9UPZ3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.15□□□□□ -1.26
HPS5Q9UPZ3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HPS5Q9UPZ3 AL353997.4-201ENST00000586196 166 ntBASIC7.15□□□□□ -1.26
HPS5Q9UPZ3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HPS5Q9UPZ3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HPS5Q9UPZ3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.15□□□□□ -1.26
HPS5Q9UPZ3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC7.15□□□□□ -1.26
HPS5Q9UPZ3 AL512782.1-201ENST00000603093 364 ntBASIC7.15□□□□□ -1.26
HPS5Q9UPZ3 MIR6820-201ENST00000611508 62 ntBASIC7.15□□□□□ -1.26
HPS5Q9UPZ3 AC103705.1-201ENST00000619013 241 ntBASIC7.15□□□□□ -1.26
HPS5Q9UPZ3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 AC068769.1-201ENST00000474767 2426 ntBASIC7.15□□□□□ -1.27
HPS5Q9UPZ3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 MIR375-201ENST00000362103 64 ntBASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 RN7SKP125-201ENST00000410481 302 ntBASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 AC108032.1-201ENST00000416706 207 ntBASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 OR3D1P-201ENST00000438288 955 ntBASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 AC090453.1-201ENST00000495560 436 ntBASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 RNU6-570P-201ENST00000517051 105 ntBASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 MIR4505-201ENST00000582238 73 ntBASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 AC010424.2-201ENST00000607594 443 ntBASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
HPS5Q9UPZ3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 AC005225.5-201ENST00000623547 2225 ntBASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 PABPC1P7-201ENST00000413177 1513 ntBASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 DHX40P1-201ENST00000588725 1412 ntBASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 RBMY1HP-201ENST00000382759 1389 ntBASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 AL096829.1-201ENST00000413677 457 ntBASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 AC016027.5-201ENST00000427227 210 ntBASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 LAMTOR5P1-201ENST00000444290 270 ntBASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 TRBVB-201ENST00000477100 408 ntBASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 RNU6-189P-201ENST00000516120 101 ntBASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 IMMP1LP3-201ENST00000604197 224 ntBASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 RAC1P9-201ENST00000604990 392 ntBASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 DUSP12P1-201ENST00000612874 516 ntBASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.13□□□□□ -1.27
HPS5Q9UPZ3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HPS5Q9UPZ3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.12□□□□□ -1.27
HPS5Q9UPZ3 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
HPS5Q9UPZ3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HPS5Q9UPZ3 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.12□□□□□ -1.27
HPS5Q9UPZ3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.12□□□□□ -1.27
HPS5Q9UPZ3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HPS5Q9UPZ3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HPS5Q9UPZ3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
HPS5Q9UPZ3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.12□□□□□ -1.27
HPS5Q9UPZ3 RNU105B-201ENST00000364478 208 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms