Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 AC006390.1-201ENST00000508068 283 ntBASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 AC117522.1-201ENST00000509821 380 ntBASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 AC114781.4-201ENST00000513707 639 ntBASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 AC022861.1-201ENST00000522981 663 ntBASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 AP000859.1-201ENST00000525536 307 ntBASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 FAM92A1P1-201ENST00000528023 890 ntBASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 AC034268.2-201ENST00000571784 482 ntBASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 RN7SL290P-201ENST00000578661 300 ntBASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 MIR3138-201ENST00000585238 82 ntBASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 HMGN1P30-201ENST00000589286 268 ntBASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 DUXAP9-208ENST00000622815 614 ntBASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 AC097063.1-201ENST00000426714 1797 ntBASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 AL731566.1-201ENST00000620490 1937 ntBASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
ZNRF3Q9ULT6 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 SNORA37-201ENST00000384504 129 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 AC009237.5-201ENST00000414271 501 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 RPEP2-201ENST00000432149 701 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 RPL17P49-201ENST00000443728 411 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 RN7SL558P-201ENST00000497468 299 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 AC007016.1-201ENST00000512110 244 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 Y_RNA.672-201ENST00000516289 104 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 AC109635.3-201ENST00000529536 185 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 A2MP1-204ENST00000566278 4130 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 MIR4504-201ENST00000577413 92 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 SNORA74C-1-201ENST00000580726 201 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 NF1P5-201ENST00000588287 448 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 AC019072.1-201ENST00000604535 1551 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 COX6CP4-201ENST00000605798 228 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 AL161637.1-201ENST00000622380 412 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 AC022140.2-201ENST00000623500 188 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 AC093775.1-201ENST00000624154 1868 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 CCT4P2-201ENST00000233836 1548 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 AC004656.1-201ENST00000568479 4951 ntBASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNRF3Q9ULT6 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 Y_RNA.1-201ENST00000352915 104 ntBASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 Y_RNA.70-201ENST00000362886 110 ntBASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 RNU1-82P-201ENST00000390851 165 ntBASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 AC016769.3-201ENST00000396562 315 ntBASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 ARF4P3-201ENST00000397387 509 ntBASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 RPS20P2-201ENST00000402520 389 ntBASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 RNU2-8P-201ENST00000410727 190 ntBASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 AL591848.1-201ENST00000413092 322 ntBASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.77□□□□□ -1.49
ZNRF3Q9ULT6 USP12PX-201ENST00000432383 1057 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms