Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC090948.1-201ENST00000607464 549 ntBASIC5.93□□□□□ -1.46
SYNGAP1Q96PV0 AL627230.1-201ENST00000613077 211 ntBASIC5.93□□□□□ -1.46
SYNGAP1Q96PV0 AL591926.8-201ENST00000616876 211 ntBASIC5.93□□□□□ -1.46
SYNGAP1Q96PV0 uc_338.9-201ENST00000617424 182 ntBASIC5.93□□□□□ -1.46
SYNGAP1Q96PV0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNGAP1Q96PV0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNGAP1Q96PV0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNGAP1Q96PV0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNGAP1Q96PV0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNGAP1Q96PV0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNGAP1Q96PV0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 MTND5P3-201ENST00000438536 1800 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 RN7SKP95-201ENST00000362860 303 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 RNU6-251P-201ENST00000363235 104 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 RNU6-254P-201ENST00000363377 107 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 MIR606-201ENST00000384851 96 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 NPM1P40-201ENST00000412758 733 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AC079809.1-201ENST00000415468 276 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 RSL24D1P6-201ENST00000426934 401 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 RPL7P15-201ENST00000461190 712 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AC010301.1-201ENST00000473936 355 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 SUMO2P4-201ENST00000504193 276 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 SCARNA13-201ENST00000516672 275 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 RN7SKP116-201ENST00000516902 319 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 RNU6-1003P-201ENST00000517099 105 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 MIR7853-201ENST00000584820 132 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 uc_338.5-201ENST00000611839 155 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AC093838.1-201ENST00000613014 469 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AC099654.6-201ENST00000636487 512 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AL442128.2-201ENST00000620246 1824 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.92□□□□□ -1.46
SYNGAP1Q96PV0 AC018628.1-201ENST00000624147 3819 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AL360270.2-201ENST00000562952 5985 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 Y_RNA.166-201ENST00000363730 102 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 RNA5SP90-201ENST00000364801 99 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 RNU6-398P-201ENST00000384143 109 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 SNORA75.4-201ENST00000391278 119 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 TXNP7-201ENST00000406296 293 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 RNU2-9P-201ENST00000410194 145 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC234782.4-201ENST00000417646 1048 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 OR2AM1P-201ENST00000422137 422 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 RPS29P10-201ENST00000439197 166 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 CBX1P4-201ENST00000439415 457 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 RPL23AP15-201ENST00000450202 459 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC090602.1-201ENST00000469695 252 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC083798.1-201ENST00000472671 131 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms