Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 Y_RNA.577-201ENST00000384794 101 ntBASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 SNORA16.2-201ENST00000390991 127 ntBASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 RPL36P19-201ENST00000430744 301 ntBASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 MYL8P-204ENST00000431574 518 ntBASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 RPS7P3-201ENST00000443360 580 ntBASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 PLGLA-201ENST00000465668 449 ntBASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 RN7SL326P-201ENST00000477493 296 ntBASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 AL139099.1-201ENST00000497398 403 ntBASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 MIR7159-201ENST00000620587 66 ntBASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 AC110373.1-201ENST00000505994 3505 ntBASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SCUBE3Q8IX30 DOCK11P1-201ENST00000553480 5932 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 AC022034.1-201ENST00000512867 2156 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RNU6-214P-201ENST00000384130 107 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RNU6-393P-201ENST00000384475 107 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RNU6-1156P-201ENST00000410365 100 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RPL21P109-201ENST00000422213 475 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RPL12P16-201ENST00000431098 498 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 AL133396.1-201ENST00000432048 687 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RPL21P112-201ENST00000434403 463 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RPL23AP60-201ENST00000450011 454 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RBMY2TP-201ENST00000451162 947 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 LINC01399-202ENST00000458450 244 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 AC087884.1-201ENST00000469738 328 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 AC117503.1-201ENST00000472241 394 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RNU6-397P-201ENST00000516226 104 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RNU4-71P-201ENST00000516258 113 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RNU6-685P-201ENST00000517088 95 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 AC010900.2-201ENST00000604508 210 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RPSAP75-201ENST00000605848 301 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 uc_338.31-201ENST00000615595 186 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 LINC02019-201ENST00000608605 2060 ntBASIC6.61□□□□□ -1.35
SCUBE3Q8IX30 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AP000866.6-201ENST00000638898 3579 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 ZNF402P-201ENST00000404435 3100 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AL592148.3-201ENST00000608771 2646 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 RNA5SP346-201ENST00000363541 121 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 MIR433-201ENST00000384837 93 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 SNORD58.1-201ENST00000391313 66 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms