Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.55□□□□□ -2
RP1L1Q8IWN7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.55□□□□□ -2
RP1L1Q8IWN7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
RP1L1Q8IWN7 RNA5SP425-201ENST00000410336 112 ntBASIC2.54□□□□□ -2
RP1L1Q8IWN7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.54□□□□□ -2
RP1L1Q8IWN7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 RFPL4AP3-201ENST00000515267 345 ntBASIC2.54□□□□□ -2
RP1L1Q8IWN7 RPL7P20-201ENST00000520308 745 ntBASIC2.54□□□□□ -2
RP1L1Q8IWN7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 FAM60DP-201ENST00000524174 632 ntBASIC2.54□□□□□ -2
RP1L1Q8IWN7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 AC135279.1-201ENST00000543493 504 ntBASIC2.54□□□□□ -2
RP1L1Q8IWN7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 TGIF1P1-201ENST00000558095 802 ntBASIC2.54□□□□□ -2
RP1L1Q8IWN7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 LSM1P2-201ENST00000604911 322 ntBASIC2.54□□□□□ -2
RP1L1Q8IWN7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RP1L1Q8IWN7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RP1L1Q8IWN7 AL049555.1-201ENST00000562834 1933 ntBASIC2.54□□□□□ -2
RP1L1Q8IWN7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 Y_RNA.458-201ENST00000384240 102 ntBASIC2.54□□□□□ -2
RP1L1Q8IWN7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.54□□□□□ -2
RP1L1Q8IWN7 AC079298.2-201ENST00000623885 459 ntBASIC2.54□□□□□ -2
RP1L1Q8IWN7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.54□□□□□ -2
RP1L1Q8IWN7 RBBP8P1-201ENST00000449447 1844 ntBASIC2.54□□□□□ -2
RP1L1Q8IWN7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.54□□□□□ -2
RP1L1Q8IWN7 RNA5SP99-201ENST00000364020 114 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 RNU4-26P-201ENST00000410270 107 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 BX679664.1-201ENST00000434429 253 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.53□□□□□ -2
RP1L1Q8IWN7 CEACAMP4-201ENST00000457676 421 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 AC018797.3-201ENST00000513388 1241 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 AC108729.3-201ENST00000513484 108 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.53□□□□□ -2
RP1L1Q8IWN7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 RN7SKP272-201ENST00000516988 232 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC2.53□□□□□ -2
RP1L1Q8IWN7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.53□□□□□ -2
RP1L1Q8IWN7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.53□□□□□ -2
RP1L1Q8IWN7 AC044913.1-201ENST00000557200 430 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.53□□□□□ -2
RP1L1Q8IWN7 DNAJC19P3-201ENST00000594491 331 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.53□□□□□ -2
RP1L1Q8IWN7 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RP1L1Q8IWN7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
RP1L1Q8IWN7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
RP1L1Q8IWN7 AC022336.2-201ENST00000568966 2538 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.53□□□□□ -2
RP1L1Q8IWN7 RPL7P25-201ENST00000404151 721 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 RPS4XP7-201ENST00000406274 780 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.53□□□□□ -2
RP1L1Q8IWN7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.53□□□□□ -2
RP1L1Q8IWN7 OR6K1P-201ENST00000456766 971 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 RPL23AP11-201ENST00000475260 469 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.53□□□□□ -2
RP1L1Q8IWN7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.53□□□□□ -2
RP1L1Q8IWN7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC2.53□□□□□ -2
RP1L1Q8IWN7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.53□□□□□ -2
RP1L1Q8IWN7 Z82195.1-201ENST00000604558 398 ntBASIC2.53□□□□□ -2
RP1L1Q8IWN7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.53□□□□□ -2
RP1L1Q8IWN7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RP1L1Q8IWN7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.53□□□□□ -2.01
RP1L1Q8IWN7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2.01
RP1L1Q8IWN7 RPL7P26-201ENST00000333817 754 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 SNORA25.9-201ENST00000365087 128 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 RNU6-14P-201ENST00000384630 106 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 CYCSP45-201ENST00000402289 315 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 RNU2-52P-201ENST00000410680 190 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 AL645937.1-202ENST00000421799 937 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 RPS26P40-201ENST00000435209 294 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 AP001004.1-201ENST00000582468 324 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 CTSLP2-204ENST00000629029 392 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 AL139039.1-201ENST00000401900 692 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 AL590290.1-201ENST00000405336 380 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 MTCO1P42-201ENST00000457379 726 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 RN7SL283P-201ENST00000489055 303 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 AP000926.3-201ENST00000497201 299 ntBASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.52□□□□□ -2.01
RP1L1Q8IWN7 AL137246.1-201ENST00000607072 977 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms