Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.87□□□□□ -2.11
RPS28P62857 CCT7-217ENST00000626868 249 ntTSL 5 BASIC1.87□□□□□ -2.11
RPS28P62857 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RPS28P62857 CR848007.1-201ENST00000442354 1699 ntBASIC1.86□□□□□ -2.11
RPS28P62857 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPS28P62857 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPS28P62857 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.86□□□□□ -2.11
RPS28P62857 RNU1-85P-201ENST00000364127 164 ntBASIC1.86□□□□□ -2.11
RPS28P62857 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPS28P62857 SNORA51.12-201ENST00000384448 134 ntBASIC1.86□□□□□ -2.11
RPS28P62857 RNA5SP339-201ENST00000390987 122 ntBASIC1.86□□□□□ -2.11
RPS28P62857 SNORA11D-201ENST00000408548 128 ntBASIC1.86□□□□□ -2.11
RPS28P62857 U3.40-201ENST00000408706 208 ntBASIC1.86□□□□□ -2.11
RPS28P62857 SNORA11E-201ENST00000408778 128 ntBASIC1.86□□□□□ -2.11
RPS28P62857 AL139128.1-201ENST00000413921 941 ntBASIC1.86□□□□□ -2.11
RPS28P62857 MICG-208ENST00000416822 132 ntBASIC1.86□□□□□ -2.11
RPS28P62857 MYB-206ENST00000420123 1051 ntTSL 5 BASIC1.86□□□□□ -2.11
RPS28P62857 AC092865.3-201ENST00000425390 1026 ntBASIC1.86□□□□□ -2.11
RPS28P62857 AL358075.3-201ENST00000426289 226 ntBASIC1.86□□□□□ -2.11
RPS28P62857 AC127526.2-201ENST00000426436 775 ntBASIC1.86□□□□□ -2.11
RPS28P62857 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.86□□□□□ -2.11
RPS28P62857 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.86□□□□□ -2.11
RPS28P62857 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.86□□□□□ -2.11
RPS28P62857 CCNB1IP1P2-201ENST00000432876 818 ntBASIC1.86□□□□□ -2.11
RPS28P62857 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC1.86□□□□□ -2.11
RPS28P62857 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC1.86□□□□□ -2.11
RPS28P62857 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.86□□□□□ -2.11
RPS28P62857 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.86□□□□□ -2.11
RPS28P62857 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC1.86□□□□□ -2.11
RPS28P62857 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RPS28P62857 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.86□□□□□ -2.11
RPS28P62857 AC097262.1-201ENST00000452559 548 ntBASIC1.86□□□□□ -2.11
RPS28P62857 snoU13.28-201ENST00000459235 104 ntBASIC1.86□□□□□ -2.11
RPS28P62857 AC097493.1-201ENST00000463958 372 ntBASIC1.86□□□□□ -2.11
RPS28P62857 RN7SL51P-201ENST00000468230 285 ntBASIC1.86□□□□□ -2.11
RPS28P62857 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RPS28P62857 AC108734.3-201ENST00000481241 1165 ntBASIC1.86□□□□□ -2.11
RPS28P62857 OR52A4P-202ENST00000481634 799 ntBASIC1.86□□□□□ -2.11
RPS28P62857 SUMO1P1-201ENST00000497904 306 ntBASIC1.86□□□□□ -2.11
RPS28P62857 OR52A4P-203ENST00000498233 1014 ntBASIC1.86□□□□□ -2.11
RPS28P62857 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RPS28P62857 NPM1P41-201ENST00000512920 831 ntBASIC1.86□□□□□ -2.11
RPS28P62857 AC096661.1-201ENST00000515870 822 ntBASIC1.86□□□□□ -2.11
RPS28P62857 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.86□□□□□ -2.11
RPS28P62857 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RPS28P62857 CR383656.6-201ENST00000550518 394 ntBASIC1.86□□□□□ -2.11
RPS28P62857 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC1.86□□□□□ -2.11
RPS28P62857 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RPS28P62857 SNORD53-201ENST00000579969 78 ntBASIC1.86□□□□□ -2.11
RPS28P62857 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPS28P62857 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPS28P62857 IPO5P1-202ENST00000600039 287 ntBASIC1.86□□□□□ -2.11
RPS28P62857 AL354984.3-201ENST00000604803 325 ntBASIC1.86□□□□□ -2.11
RPS28P62857 SNORD14A-201ENST00000606526 91 ntBASIC1.86□□□□□ -2.11
RPS28P62857 AC012511.1-201ENST00000608140 449 ntBASIC1.86□□□□□ -2.11
RPS28P62857 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC1.86□□□□□ -2.11
RPS28P62857 AP005137.2-201ENST00000609238 400 ntBASIC1.86□□□□□ -2.11
RPS28P62857 AC079395.3-201ENST00000615161 484 ntBASIC1.86□□□□□ -2.11
RPS28P62857 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
RPS28P62857 FRG1DP-201ENST00000635586 771 ntBASIC1.86□□□□□ -2.11
RPS28P62857 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC1.86□□□□□ -2.11
RPS28P62857 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.86□□□□□ -2.11
RPS28P62857 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
RPS28P62857 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.86□□□□□ -2.11
RPS28P62857 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPS28P62857 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPS28P62857 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPS28P62857 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RPS28P62857 TPTE2P4-201ENST00000258589 1605 ntBASIC1.85□□□□□ -2.11
RPS28P62857 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPS28P62857 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPS28P62857 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
RPS28P62857 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPS28P62857 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPS28P62857 CASKP1-201ENST00000412870 582 ntBASIC1.85□□□□□ -2.11
RPS28P62857 OR52N3P-201ENST00000413417 934 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC1.85□□□□□ -2.11
RPS28P62857 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.85□□□□□ -2.11
RPS28P62857 RPL7P44-201ENST00000424827 742 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.85□□□□□ -2.11
RPS28P62857 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC1.85□□□□□ -2.11
RPS28P62857 AC092573.2-201ENST00000434546 243 ntBASIC1.85□□□□□ -2.11
RPS28P62857 CR391992.1-201ENST00000438601 394 ntBASIC1.85□□□□□ -2.11
RPS28P62857 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPS28P62857 IPO7P1-201ENST00000442031 636 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC1.85□□□□□ -2.11
RPS28P62857 AL589880.1-201ENST00000448271 287 ntBASIC1.85□□□□□ -2.11
RPS28P62857 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RPS28P62857 ACA64.1-201ENST00000459171 127 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AC053481.1-201ENST00000467217 306 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AC097484.1-201ENST00000471148 389 ntBASIC1.85□□□□□ -2.11
RPS28P62857 ACTR3P3-201ENST00000480448 893 ntBASIC1.85□□□□□ -2.11
RPS28P62857 HMGN2P25-201ENST00000486956 268 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AC004453.1-201ENST00000487895 408 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AC079804.2-201ENST00000490376 200 ntBASIC1.85□□□□□ -2.11
RPS28P62857 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC1.85□□□□□ -2.11
RPS28P62857 F11-205ENST00000492972 1204 ntTSL 2 BASIC1.85□□□□□ -2.11
RPS28P62857 AP000926.3-201ENST00000497201 299 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC1.85□□□□□ -2.11
RPS28P62857 KLRA1P-201ENST00000503499 986 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms