Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HMGN1P24-201ENST00000412282 298 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 RPL30P2-201ENST00000414021 291 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN6P56747 AL158071.1-201ENST00000430315 461 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 ZNF965P-201ENST00000432501 817 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN6P56747 NANOGNBP1-201ENST00000448444 480 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 SNRPGP3-201ENST00000469405 227 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN6P56747 RPS3AP43-201ENST00000479743 781 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN6P56747 TRAV31-201ENST00000502780 342 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 AC069306.1-201ENST00000507006 843 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 FCF1P8-201ENST00000510322 597 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN6P56747 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN6P56747 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN6P56747 IGKV2D-23-201ENST00000518179 286 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN6P56747 AC104115.2-201ENST00000523026 687 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN6P56747 AC113192.3-201ENST00000529152 742 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.25□□□□□ -1.89
CLDN6P56747 AC005476.1-201ENST00000554427 397 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN6P56747 KLKP1-201ENST00000595979 403 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN6P56747 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN6P56747 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN6P56747 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN6P56747 AL021368.2-201ENST00000606125 5352 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN6P56747 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN6P56747 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN6P56747 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN6P56747 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CLDN6P56747 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN6P56747 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CLDN6P56747 HSPE1P26-201ENST00000405341 275 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN6P56747 AL353678.1-201ENST00000422735 741 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 MTND4LP14-201ENST00000429447 288 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN6P56747 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN6P56747 Z77249.1-201ENST00000444622 1175 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN6P56747 RNU6-775P-201ENST00000459318 96 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 RPL21P8-201ENST00000465083 535 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 RPL27AP5-201ENST00000469428 449 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN6P56747 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN6P56747 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN6P56747 AL442163.2-201ENST00000553912 710 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN6P56747 AGGF1P8-201ENST00000562979 1000 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 AC090312.2-201ENST00000582687 378 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN6P56747 AL355802.4-201ENST00000607635 548 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 AC103710.3-201ENST00000608157 948 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 AC009464.1-201ENST00000615731 469 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 AC025016.1-201ENST00000616746 682 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 U7.8-201ENST00000619968 63 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 AC090617.9-201ENST00000623751 147 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 AC104820.1-201ENST00000624183 307 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN6P56747 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN6P56747 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN6P56747 AC011978.2-201ENST00000569835 2054 ntBASIC3.24□□□□□ -1.89
CLDN6P56747 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN6P56747 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN6P56747 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN6P56747 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN6P56747 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CLDN6P56747 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN6P56747 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN6P56747 NACA3P-201ENST00000359690 648 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 SNORA5B-201ENST00000363786 132 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 RNU6-283P-201ENST00000364788 107 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 SNORA44-201ENST00000384584 132 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
CLDN6P56747 HMGB3P18-201ENST00000406327 590 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 LIPT1P1-201ENST00000415870 1186 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 AC127526.1-201ENST00000417526 366 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN6P56747 MTND2P16-201ENST00000419987 799 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 MTND4P24-201ENST00000424002 397 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 AC002075.2-201ENST00000425207 252 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 HMGB1P45-201ENST00000435986 653 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN6P56747 RPS29P31-201ENST00000446147 164 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 MRPL35P4-201ENST00000453682 566 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN6P56747 RPL23AP62-201ENST00000463396 453 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN6P56747 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN6P56747 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN6P56747 AC016065.2-201ENST00000514530 444 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 CIR1P1-201ENST00000524055 1133 ntBASIC3.23□□□□□ -1.89
CLDN6P56747 OR4R3P-201ENST00000525084 838 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms