Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
BRCA2P51587 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
BRCA2P51587 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
BRCA2P51587 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
BRCA2P51587 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
BRCA2P51587 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
BRCA2P51587 ST13P14-201ENST00000474095 734 ntBASIC2.88□□□□□ -1.95
BRCA2P51587 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
BRCA2P51587 USP8P1-201ENST00000494673 3183 ntBASIC2.88□□□□□ -1.95
BRCA2P51587 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
BRCA2P51587 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
BRCA2P51587 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
BRCA2P51587 AC112220.1-201ENST00000434628 355 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 RPS20P5-201ENST00000434808 360 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 AC106872.3-201ENST00000495104 446 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.87□□□□□ -1.95
BRCA2P51587 AC011602.1-201ENST00000546484 331 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC2.87□□□□□ -1.95
BRCA2P51587 AL136981.2-201ENST00000617319 734 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.87□□□□□ -1.95
BRCA2P51587 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
BRCA2P51587 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
BRCA2P51587 HMGB3P11-201ENST00000440127 604 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.87□□□□□ -1.95
BRCA2P51587 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.87□□□□□ -1.95
BRCA2P51587 SNORA31.1-201ENST00000515993 133 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 SNORA31.5-201ENST00000516190 133 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 NARSP2-201ENST00000518524 679 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
BRCA2P51587 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
BRCA2P51587 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
BRCA2P51587 AL356292.1-201ENST00000283110 373 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 OR2X1P-201ENST00000421144 687 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC2.87□□□□□ -1.95
BRCA2P51587 AC108471.1-201ENST00000513977 287 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 MYL12AP1-201ENST00000518490 515 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.87□□□□□ -1.95
BRCA2P51587 AC090897.3-201ENST00000636973 1157 ntBASIC2.87□□□□□ -1.95
BRCA2P51587 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.87□□□□□ -1.95
BRCA2P51587 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
BRCA2P51587 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC2.86□□□□□ -1.95
BRCA2P51587 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
BRCA2P51587 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
BRCA2P51587 MIR448-201ENST00000362131 111 ntBASIC2.86□□□□□ -1.95
BRCA2P51587 SNORA25.9-201ENST00000365087 128 ntBASIC2.86□□□□□ -1.95
BRCA2P51587 SNORA70E-201ENST00000384492 135 ntBASIC2.86□□□□□ -1.95
BRCA2P51587 RPLP0P7-201ENST00000416050 667 ntBASIC2.86□□□□□ -1.95
BRCA2P51587 RPL30P9-201ENST00000465586 330 ntBASIC2.86□□□□□ -1.95
BRCA2P51587 AC007423.1-201ENST00000605009 627 ntBASIC2.86□□□□□ -1.95
BRCA2P51587 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
BRCA2P51587 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
BRCA2P51587 AL024474.1-201ENST00000404655 591 ntBASIC2.86□□□□□ -1.95
BRCA2P51587 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
BRCA2P51587 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.86□□□□□ -1.95
BRCA2P51587 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.86□□□□□ -1.95
BRCA2P51587 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.86□□□□□ -1.95
BRCA2P51587 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
BRCA2P51587 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
BRCA2P51587 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.86□□□□□ -1.95
BRCA2P51587 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.86□□□□□ -1.95
BRCA2P51587 RNU6-253P-201ENST00000384730 105 ntBASIC2.86□□□□□ -1.95
BRCA2P51587 TGIF1P1-201ENST00000558095 802 ntBASIC2.86□□□□□ -1.95
BRCA2P51587 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.86□□□□□ -1.95
BRCA2P51587 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
BRCA2P51587 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.85□□□□□ -1.95
BRCA2P51587 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
BRCA2P51587 RNU1-35P-201ENST00000362782 153 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 RPL21P75-201ENST00000396599 483 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 RPL21P1-201ENST00000399532 476 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 RPL21P28-201ENST00000401418 483 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 AL592114.1-201ENST00000403842 483 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 AL353705.4-201ENST00000449661 238 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.85□□□□□ -1.95
BRCA2P51587 RPL21P16-201ENST00000495531 483 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.85□□□□□ -1.95
BRCA2P51587 AC018630.1-201ENST00000541376 925 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
BRCA2P51587 AC068313.1-201ENST00000604028 1008 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
BRCA2P51587 MIR518E-201ENST00000385252 88 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 U3.23-201ENST00000391132 200 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 AC011816.1-201ENST00000441346 546 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 OR6K1P-201ENST00000456766 971 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 PPP1R11P1-201ENST00000486095 376 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.85□□□□□ -1.95
BRCA2P51587 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.85□□□□□ -1.95
BRCA2P51587 SNORA35B-201ENST00000607417 129 ntBASIC2.85□□□□□ -1.95
BRCA2P51587 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
BRCA2P51587 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
BRCA2P51587 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
BRCA2P51587 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
BRCA2P51587 FAR1P1-201ENST00000427163 934 ntBASIC2.84□□□□□ -1.95
BRCA2P51587 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.84□□□□□ -1.95
BRCA2P51587 TAF9P1-201ENST00000445421 515 ntBASIC2.84□□□□□ -1.95
BRCA2P51587 TAF9P2-201ENST00000454958 515 ntBASIC2.84□□□□□ -1.95
BRCA2P51587 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.84□□□□□ -1.95
BRCA2P51587 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.84□□□□□ -1.95
BRCA2P51587 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
BRCA2P51587 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC2.84□□□□□ -1.95
BRCA2P51587 U3.6-201ENST00000363622 211 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms