Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RNU4-91P-201ENST00000364778 135 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 SNORA70E-201ENST00000384492 135 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 SNORA37-201ENST00000384504 129 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 AC025750.1-201ENST00000399891 379 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 MIR320C1-201ENST00000408566 88 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.33□□□□□ -1.56
CNGA1P29973 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.33□□□□□ -1.56
CNGA1P29973 MTCO2P5-201ENST00000422621 426 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 GLRXP1-201ENST00000423261 334 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 LSM1P1-201ENST00000438629 273 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.33□□□□□ -1.56
CNGA1P29973 HSPE1P28-201ENST00000443139 211 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.33□□□□□ -1.56
CNGA1P29973 COX6CP12-201ENST00000446748 202 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNGA1P29973 AC002381.1-201ENST00000447049 280 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.33□□□□□ -1.56
CNGA1P29973 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.33□□□□□ -1.56
CNGA1P29973 PAXBP1P1-201ENST00000449315 447 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 AC079168.2-201ENST00000453977 416 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.33□□□□□ -1.56
CNGA1P29973 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.33□□□□□ -1.56
CNGA1P29973 AC017015.1-201ENST00000477387 286 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 AC106872.3-201ENST00000495104 446 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 RN7SL558P-201ENST00000497468 299 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 MTCO3P7-201ENST00000510008 774 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 MTCO3P44-201ENST00000510977 541 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNGA1P29973 OR5AP1P-201ENST00000529730 940 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.33□□□□□ -1.56
CNGA1P29973 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.33□□□□□ -1.56
CNGA1P29973 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.33□□□□□ -1.56
CNGA1P29973 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.33□□□□□ -1.56
CNGA1P29973 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.33□□□□□ -1.56
CNGA1P29973 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNGA1P29973 MIR3138-201ENST00000585238 82 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 AC103710.4-201ENST00000609301 899 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 AC105429.2-201ENST00000610567 517 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 AC122108.2-201ENST00000611946 526 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNGA1P29973 AC025048.6-202ENST00000627667 438 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 NUP58P1-201ENST00000502546 1738 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 AC097714.1-201ENST00000511272 1647 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 ZNF137P-201ENST00000456718 1920 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 AP001273.1-201ENST00000624493 3152 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNGA1P29973 AC126323.6-202ENST00000568092 3511 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 NEAT1-202ENST00000501122 22743 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 MTND4P4-201ENST00000439033 1366 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC019155.1-201ENST00000382242 574 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 RNU6-878P-201ENST00000384578 110 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AL355379.1-201ENST00000405542 640 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AL645608.4-201ENST00000423619 154 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 OR2AH1P-201ENST00000425717 928 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.32□□□□□ -1.56
CNGA1P29973 AL589823.1-201ENST00000429577 183 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.32□□□□□ -1.56
CNGA1P29973 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.32□□□□□ -1.56
CNGA1P29973 RSU1P2-202ENST00000437884 485 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 H2AFZP5-201ENST00000446960 382 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 NUTF2P3-201ENST00000448540 384 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.32□□□□□ -1.56
CNGA1P29973 SUMO2P2-201ENST00000456482 255 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC087312.1-201ENST00000471411 480 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.32□□□□□ -1.56
CNGA1P29973 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.32□□□□□ -1.56
CNGA1P29973 MTND3P5-201ENST00000512798 333 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.32□□□□□ -1.56
CNGA1P29973 RNU6-709P-201ENST00000517257 104 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.32□□□□□ -1.56
CNGA1P29973 IGHV3-32-201ENST00000519182 355 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC013828.2-201ENST00000532487 235 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AP000873.5-201ENST00000533906 236 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.32□□□□□ -1.56
CNGA1P29973 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.32□□□□□ -1.56
CNGA1P29973 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.32□□□□□ -1.56
CNGA1P29973 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC083760.1-201ENST00000589621 670 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 BNIP3P23-201ENST00000599655 511 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC012065.4-201ENST00000602445 679 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.32□□□□□ -1.56
CNGA1P29973 AL009028.1-201ENST00000604895 802 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 IMMP1LP1-201ENST00000605170 488 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC128687.1-201ENST00000605304 619 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC068276.1-201ENST00000605793 379 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC239868.4-201ENST00000608318 671 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 AC114781.5-201ENST00000615297 108 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 ZYXP1-201ENST00000617638 118 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 U3.53-201ENST00000628922 216 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CNGA1P29973 AC000123.3-201ENST00000624029 4975 ntBASIC5.32□□□□□ -1.56
CNGA1P29973 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNGA1P29973 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNGA1P29973 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.31□□□□□ -1.56
CNGA1P29973 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNGA1P29973 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.31□□□□□ -1.56
CNGA1P29973 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNGA1P29973 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.31□□□□□ -1.56
CNGA1P29973 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
CNGA1P29973 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms