Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.71□□□□□ -1.98
COL8A2P25067 RNU6-40P-201ENST00000384254 107 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 GSTA8P-201ENST00000404253 637 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 RNU6-55P-201ENST00000411092 107 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 RNU6-954P-201ENST00000411355 107 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL8A2P25067 GLRXP1-201ENST00000423261 334 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 ETF1P3-201ENST00000430422 1160 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.71□□□□□ -1.98
COL8A2P25067 MTCO1P52-201ENST00000433928 531 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 MTND2P8-201ENST00000450555 1025 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 RN7SL863P-201ENST00000462370 296 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 SNRPGP3-201ENST00000469405 227 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 AL136126.1-201ENST00000473603 402 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 RPL23AP44-201ENST00000482216 473 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.71□□□□□ -1.98
COL8A2P25067 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.71□□□□□ -1.98
COL8A2P25067 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.71□□□□□ -1.98
COL8A2P25067 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.71□□□□□ -1.98
COL8A2P25067 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.71□□□□□ -1.98
COL8A2P25067 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.71□□□□□ -1.98
COL8A2P25067 AC093331.1-201ENST00000521474 169 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.71□□□□□ -1.98
COL8A2P25067 AC022790.1-201ENST00000522872 204 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.71□□□□□ -1.98
COL8A2P25067 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
COL8A2P25067 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.71□□□□□ -1.98
COL8A2P25067 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.71□□□□□ -1.98
COL8A2P25067 AC006518.1-201ENST00000541449 943 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 AC004024.1-201ENST00000549244 247 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.71□□□□□ -1.98
COL8A2P25067 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.71□□□□□ -1.98
COL8A2P25067 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.71□□□□□ -1.98
COL8A2P25067 AC011471.1-201ENST00000585766 187 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.71□□□□□ -1.98
COL8A2P25067 AC007687.1-201ENST00000602704 304 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 ABI1P1-201ENST00000603375 1120 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 RPL21P136-201ENST00000605378 396 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 AL162274.2-201ENST00000614406 332 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
COL8A2P25067 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL8A2P25067 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.7□□□□□ -1.98
COL8A2P25067 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL8A2P25067 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
COL8A2P25067 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
COL8A2P25067 AL139811.1-201ENST00000424779 2299 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 RNF6P1-201ENST00000444889 1784 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
COL8A2P25067 SNORD115-48-201ENST00000364764 76 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 RNU6-452P-201ENST00000384406 107 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 RNU2-72P-201ENST00000411175 163 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.7□□□□□ -1.98
COL8A2P25067 RPS15AP6-201ENST00000420703 385 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 GTF2IP23-201ENST00000423746 351 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.7□□□□□ -1.98
COL8A2P25067 BX890604.2-201ENST00000427883 474 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 AL353705.1-201ENST00000433468 480 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 ELOCP11-201ENST00000436690 332 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 CST9LP2-201ENST00000437612 320 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 ELOCP16-201ENST00000444494 332 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 TPMTP4-201ENST00000450749 678 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.7□□□□□ -1.98
COL8A2P25067 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.7□□□□□ -1.98
COL8A2P25067 AP001992.1-205ENST00000462248 379 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.7□□□□□ -1.98
COL8A2P25067 AC092451.1-201ENST00000480211 153 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 AC006445.1-201ENST00000491925 405 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 OR9N1P-202ENST00000494289 481 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 AC012170.1-201ENST00000495139 359 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 HMGB1P3-201ENST00000502802 616 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 AC021146.5-201ENST00000503544 545 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.7□□□□□ -1.98
COL8A2P25067 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.7□□□□□ -1.98
COL8A2P25067 TXNP6-201ENST00000510190 310 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 HMGB1P46-201ENST00000520062 610 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 CKS1BP1-201ENST00000555221 240 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.7□□□□□ -1.98
COL8A2P25067 UBL5P2-201ENST00000583788 219 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.7□□□□□ -1.98
COL8A2P25067 AF131215.7-201ENST00000602443 707 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 AC092474.3-201ENST00000603022 568 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 BNIP3P19-201ENST00000605397 577 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 AL355802.4-201ENST00000607635 548 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 AL513477.2-201ENST00000607858 568 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 CR589904.2-201ENST00000612533 440 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 AC138932.5-201ENST00000617759 563 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL8A2P25067 AC138915.3-201ENST00000562908 1389 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 AC009501.3-201ENST00000605001 1352 ntBASIC2.7□□□□□ -1.98
COL8A2P25067 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.7□□□□□ -1.98
COL8A2P25067 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL8A2P25067 AL353743.1-202ENST00000431724 1695 ntBASIC2.69□□□□□ -1.98
COL8A2P25067 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.69□□□□□ -1.98
COL8A2P25067 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.69□□□□□ -1.98
COL8A2P25067 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL8A2P25067 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms