Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.81□□□□□ -1.64
POLR2AP24928 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
POLR2AP24928 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
POLR2AP24928 HMGB1P5-201ENST00000255320 642 ntBASIC4.81□□□□□ -1.64
POLR2AP24928 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
POLR2AP24928 MTCO1P17-201ENST00000411522 491 ntBASIC4.81□□□□□ -1.64
POLR2AP24928 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
POLR2AP24928 AL596276.1-201ENST00000434465 418 ntBASIC4.81□□□□□ -1.64
POLR2AP24928 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.81□□□□□ -1.64
POLR2AP24928 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.81□□□□□ -1.64
POLR2AP24928 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.81□□□□□ -1.64
POLR2AP24928 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
POLR2AP24928 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.81□□□□□ -1.64
POLR2AP24928 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.81□□□□□ -1.64
POLR2AP24928 AC138409.2-202ENST00000507274 458 ntBASIC4.81□□□□□ -1.64
POLR2AP24928 AC093815.1-201ENST00000508637 280 ntBASIC4.81□□□□□ -1.64
POLR2AP24928 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.81□□□□□ -1.64
POLR2AP24928 TCP11X3P-202ENST00000514289 1254 ntBASIC4.81□□□□□ -1.64
POLR2AP24928 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.81□□□□□ -1.64
POLR2AP24928 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.81□□□□□ -1.64
POLR2AP24928 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.81□□□□□ -1.64
POLR2AP24928 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.81□□□□□ -1.64
POLR2AP24928 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.81□□□□□ -1.64
POLR2AP24928 AL390838.2-201ENST00000602394 274 ntBASIC4.81□□□□□ -1.64
POLR2AP24928 AC012065.4-201ENST00000602445 679 ntBASIC4.81□□□□□ -1.64
POLR2AP24928 AC091965.4-201ENST00000607691 587 ntBASIC4.81□□□□□ -1.64
POLR2AP24928 AP005137.2-201ENST00000609238 400 ntBASIC4.81□□□□□ -1.64
POLR2AP24928 MIR7975-201ENST00000619350 68 ntBASIC4.81□□□□□ -1.64
POLR2AP24928 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.81□□□□□ -1.64
POLR2AP24928 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
POLR2AP24928 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.81□□□□□ -1.64
POLR2AP24928 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
POLR2AP24928 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.81□□□□□ -1.64
POLR2AP24928 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
POLR2AP24928 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
POLR2AP24928 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
POLR2AP24928 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.8□□□□□ -1.64
POLR2AP24928 RNU6-707P-201ENST00000364647 95 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AL034403.1-201ENST00000399414 885 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 FGF7P8-201ENST00000402994 292 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 MIR548F1-201ENST00000408667 84 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 RNA5SP80-201ENST00000410475 111 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.8□□□□□ -1.64
POLR2AP24928 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
POLR2AP24928 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.8□□□□□ -1.64
POLR2AP24928 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.8□□□□□ -1.64
POLR2AP24928 MTCO1P48-201ENST00000448024 1096 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AC003071.1-201ENST00000451219 789 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 RPL5P24-201ENST00000463742 885 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.8□□□□□ -1.64
POLR2AP24928 AC090013.1-201ENST00000485147 480 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.8□□□□□ -1.64
POLR2AP24928 RNU6-1334P-201ENST00000516032 105 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 RNU6-718P-201ENST00000516166 105 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 SCARNA14-201ENST00000516903 136 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 MTCO2P4-201ENST00000517968 247 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.8□□□□□ -1.64
POLR2AP24928 AC005730.3-201ENST00000583067 366 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.8□□□□□ -1.64
POLR2AP24928 BNIP3P11-201ENST00000603878 563 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AC243654.2-201ENST00000612843 443 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AC090517.2-201ENST00000614966 680 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AC011472.4-201ENST00000615848 491 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.8□□□□□ -1.64
POLR2AP24928 AC138393.1-206ENST00000540997 1886 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
POLR2AP24928 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
POLR2AP24928 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.8□□□□□ -1.64
POLR2AP24928 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.8□□□□□ -1.64
POLR2AP24928 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
POLR2AP24928 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
POLR2AP24928 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
POLR2AP24928 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
POLR2AP24928 RNU1-44P-201ENST00000384453 163 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 MIR490-201ENST00000384865 128 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 RNU6-316P-201ENST00000391027 107 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AC096664.2-201ENST00000411843 406 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 MTCYBP38-201ENST00000417160 1123 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.8□□□□□ -1.64
POLR2AP24928 SKP1P3-201ENST00000429280 487 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.8□□□□□ -1.64
POLR2AP24928 PPIAP17-201ENST00000438507 471 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.8□□□□□ -1.64
POLR2AP24928 AL592447.1-201ENST00000447592 540 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 RPS27AP15-201ENST00000447672 466 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AL451050.1-201ENST00000450126 415 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AC106707.2-201ENST00000484182 374 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 ACTG1P13-201ENST00000486987 1043 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.8□□□□□ -1.64
POLR2AP24928 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.8□□□□□ -1.64
POLR2AP24928 AC025260.1-201ENST00000548858 430 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.8□□□□□ -1.64
POLR2AP24928 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.8□□□□□ -1.64
POLR2AP24928 AC012414.6-201ENST00000568241 401 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AC022655.2-201ENST00000577280 318 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 MIR4660-201ENST00000583549 74 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AP000860.1-201ENST00000605250 559 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 AC008945.2-201ENST00000606056 604 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms