Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DPB1P04440 SNORD105B-201ENST00000458770 79 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 SNORD108-201ENST00000459332 71 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 RPL7P15-201ENST00000461190 712 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DPB1P04440 MTCO2P9-201ENST00000503214 694 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DPB1P04440 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DPB1P04440 AC112518.2-201ENST00000508565 425 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 RNU6-416P-201ENST00000516265 103 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3□□□□□ -1.93
HLA-DPB1P04440 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DPB1P04440 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPB1P04440 OR8I1P-201ENST00000529291 931 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DPB1P04440 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DPB1P04440 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DPB1P04440 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPB1P04440 AL136520.1-202ENST00000555494 763 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPB1P04440 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DPB1P04440 MIR3922-201ENST00000585192 84 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AC020914.6-201ENST00000594327 272 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 RPL21P136-201ENST00000605378 396 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AL158211.2-201ENST00000607282 395 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AL109659.3-201ENST00000624985 950 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPB1P04440 AC009093.8-201ENST00000641769 292 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AC046144.1-201ENST00000478559 1853 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DPB1P04440 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DPB1P04440 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
HLA-DPB1P04440 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPB1P04440 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPB1P04440 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPB1P04440 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HLA-DPB1P04440 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DPB1P04440 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 MIR200C-201ENST00000384980 68 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 RPL22P22-201ENST00000395439 379 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 RPL21P3-201ENST00000395517 478 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 RNA5SP44-201ENST00000410446 133 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 RPS29P4-201ENST00000414733 161 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC012065.2-201ENST00000421295 375 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC091286.1-201ENST00000431233 461 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AL513175.1-201ENST00000431492 780 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 ARL4AP4-201ENST00000434170 518 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC006994.1-201ENST00000438212 839 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AL158053.1-201ENST00000441503 453 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 HSFY3P-201ENST00000444242 1191 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 Z95327.1-201ENST00000446082 482 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 BX276092.4-201ENST00000452056 248 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 GTF2IP12-201ENST00000456547 356 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC146507.2-201ENST00000460608 476 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 RPS4XP6-201ENST00000477670 797 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC025518.1-201ENST00000479856 347 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 RPL21P103-201ENST00000479921 488 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC092185.1-201ENST00000491371 97 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC005726.1-201ENST00000494679 427 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC093278.1-201ENST00000494700 600 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 RNU1-143P-201ENST00000516296 146 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC026403.1-201ENST00000518938 295 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 IGJP1-201ENST00000522682 475 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC004217.3-201ENST00000551552 878 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 SERPINE4P-201ENST00000554978 281 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AL845331.3-202ENST00000562856 261 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 U1.23-201ENST00000610293 146 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 RNU1-68P-201ENST00000615382 146 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC006133.1-201ENST00000617106 264 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 SNORD39.4-201ENST00000620099 78 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 U1.39-201ENST00000621562 146 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC034229.5-201ENST00000624258 185 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms