Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 HMGB1P5-201ENST00000255320 642 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH7O60245 RNA5SP239-201ENST00000410218 129 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH7O60245 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH7O60245 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH7O60245 AL391219.1-201ENST00000422570 483 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 RPL7P4-203ENST00000430239 730 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 USP9YP31-201ENST00000431405 881 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 KCTD9P3-201ENST00000434597 1169 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 HMGB1P37-201ENST00000439613 609 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AC004865.1-201ENST00000442276 1003 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH7O60245 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH7O60245 AP000936.2-201ENST00000447151 681 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH7O60245 RPS11P1-201ENST00000451072 473 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH7O60245 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH7O60245 AC092754.2-201ENST00000463506 460 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 RAP1BP2-201ENST00000478270 544 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDH7O60245 AC109458.1-201ENST00000508858 316 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AC048346.1-201ENST00000510247 144 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 XKRY-201ENST00000510392 1100 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AC010285.3-201ENST00000511668 676 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 Y_RNA.655-201ENST00000515919 96 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 SNORA31.9-201ENST00000516429 84 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AC022790.1-201ENST00000522872 204 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH7O60245 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH7O60245 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDH7O60245 AP001317.1-201ENST00000531194 960 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDH7O60245 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH7O60245 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH7O60245 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH7O60245 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH7O60245 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH7O60245 GTF2IP8-201ENST00000560687 584 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH7O60245 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH7O60245 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH7O60245 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDH7O60245 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH7O60245 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH7O60245 MIR3939-201ENST00000582614 106 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AC068790.5-201ENST00000602741 355 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDH7O60245 MLECP1-201ENST00000615893 709 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AC004825.2-201ENST00000616634 455 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AC073348.1-201ENST00000623002 331 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 AP003072.4-201ENST00000624580 310 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 CDRT1-208ENST00000630868 794 ntBASIC3.79□□□□□ -1.8
PCDH7O60245 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH7O60245 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH7O60245 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH7O60245 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PCDH7O60245 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PCDH7O60245 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH7O60245 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH7O60245 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDH7O60245 UBE3AP2-201ENST00000429033 2259 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH7O60245 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH7O60245 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH7O60245 AL391994.1-201ENST00000254724 282 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 AC016716.1-201ENST00000265882 708 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH7O60245 RNU6-582P-201ENST00000362989 107 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 RNU5D-1-201ENST00000363299 116 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 RNU6-839P-201ENST00000363347 108 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 RNA5SP399-201ENST00000364003 117 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH7O60245 RPL23AP47-201ENST00000408017 460 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH7O60245 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH7O60245 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH7O60245 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH7O60245 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH7O60245 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH7O60245 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDH7O60245 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH7O60245 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH7O60245 RPL30P3-201ENST00000424262 333 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH7O60245 AC010153.1-201ENST00000432862 727 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH7O60245 AL356276.2-201ENST00000435919 558 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PCDH7O60245 TAF9P1-201ENST00000445421 515 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH7O60245 TAF9P2-201ENST00000454958 515 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 AP000926.1-201ENST00000479573 241 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 VPS26AP1-201ENST00000483197 979 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 AC008494.2-201ENST00000514544 370 ntBASIC3.78□□□□□ -1.8
PCDH7O60245 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms