Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RPS7P7-201ENST00000463499 571 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 GAPDHP39-201ENST00000481866 979 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 NCOR1P1-202ENST00000486162 291 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 HMGB1P38-201ENST00000490557 577 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 RPL7P47-201ENST00000497299 556 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 MTCO3P44-201ENST00000510977 541 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC023141.12-201ENST00000512399 199 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 RNU6-885P-201ENST00000516607 104 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC090079.2-201ENST00000575289 768 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC126365.2-201ENST00000580630 379 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC090330.1-201ENST00000588646 764 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AP001542.2-201ENST00000593141 364 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC022146.1-201ENST00000595307 847 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 SNRPGP15-201ENST00000600149 222 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC113368.1-201ENST00000603736 382 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC112230.1-201ENST00000604342 547 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC006077.1-201ENST00000604746 343 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AP005137.2-201ENST00000609238 400 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AL354976.1-201ENST00000613843 387 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC007275.1-201ENST00000621243 671 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC092628.2-201ENST00000622492 339 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 MFSD8-236ENST00000641509 4050 ntBASIC3.75□□□□□ -1.81
DDX47Q9H0S4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX47Q9H0S4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 OR4A15-201ENST00000314706 1035 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 RNU6-839P-201ENST00000363347 108 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 RNU6-328P-201ENST00000390887 106 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 RPL7P60-201ENST00000397636 735 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 SNORA3.3-201ENST00000408712 125 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 RNA5SP317-201ENST00000410176 116 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 RNA5SP311-201ENST00000411290 116 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 FCF1P2-201ENST00000415284 583 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 PTP4A1P5-201ENST00000420305 455 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 RPL31P12-201ENST00000422587 358 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 MTCYBP32-201ENST00000427945 1084 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AC092634.2-201ENST00000428146 1010 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 MRPS18BP2-201ENST00000434310 759 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AL162151.2-201ENST00000448875 158 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 NDUFA5P7-201ENST00000452914 242 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AC103987.1-201ENST00000473394 348 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 RNA5SP315-201ENST00000516340 116 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 snoZ278.1-201ENST00000517059 112 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 RNA5SP312-201ENST00000517068 116 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 MIR2116-201ENST00000517221 80 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 IGKV2-23-201ENST00000518729 323 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AP004242.1-201ENST00000533701 349 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AC104072.1-201ENST00000568817 668 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AC068620.3-201ENST00000602749 560 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AC025588.3-201ENST00000604182 274 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 IGHV3-29-201ENST00000604817 344 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 AL731566.2-201ENST00000618971 317 ntBASIC3.74□□□□□ -1.81
DDX47Q9H0S4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
DDX47Q9H0S4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
DDX47Q9H0S4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
DDX47Q9H0S4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
DDX47Q9H0S4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms