Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RN7SKP238-201ENST00000516483 249 ntBASIC6.66□□□□□ -1.34
PHOX2BQ99453 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC6.66□□□□□ -1.34
PHOX2BQ99453 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.66□□□□□ -1.34
PHOX2BQ99453 SAA3P-201ENST00000533267 365 ntBASIC6.66□□□□□ -1.34
PHOX2BQ99453 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.66□□□□□ -1.34
PHOX2BQ99453 CR383656.7-201ENST00000548164 174 ntBASIC6.66□□□□□ -1.34
PHOX2BQ99453 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.66□□□□□ -1.34
PHOX2BQ99453 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.66□□□□□ -1.34
PHOX2BQ99453 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.66□□□□□ -1.34
PHOX2BQ99453 AC104763.2-201ENST00000604179 382 ntBASIC6.66□□□□□ -1.34
PHOX2BQ99453 AL352984.2-201ENST00000611153 546 ntBASIC6.66□□□□□ -1.34
PHOX2BQ99453 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.66□□□□□ -1.34
PHOX2BQ99453 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
PHOX2BQ99453 AC000374.1-201ENST00000434698 1745 ntBASIC6.66□□□□□ -1.34
PHOX2BQ99453 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PHOX2BQ99453 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PHOX2BQ99453 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PHOX2BQ99453 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PHOX2BQ99453 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PHOX2BQ99453 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PHOX2BQ99453 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PHOX2BQ99453 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PHOX2BQ99453 AC027287.1-201ENST00000553115 1453 ntBASIC6.66□□□□□ -1.34
PHOX2BQ99453 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PHOX2BQ99453 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PHOX2BQ99453 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PHOX2BQ99453 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
PHOX2BQ99453 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.65□□□□□ -1.34
PHOX2BQ99453 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
PHOX2BQ99453 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.65□□□□□ -1.34
PHOX2BQ99453 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
PHOX2BQ99453 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
PHOX2BQ99453 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PHOX2BQ99453 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PHOX2BQ99453 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PHOX2BQ99453 AC092747.4-201ENST00000620519 1861 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
PHOX2BQ99453 Y_RNA.483-201ENST00000384380 101 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PHOX2BQ99453 RPS4XP7-201ENST00000406274 780 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PHOX2BQ99453 AL590135.1-201ENST00000422215 156 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 MTND5P15-201ENST00000434246 349 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 CEACAMP1-201ENST00000434624 1035 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 MTND4LP30-201ENST00000454092 297 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 PCMTD1P1-201ENST00000455560 355 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 RPL23AP31-201ENST00000456160 467 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 RNA5SP34-201ENST00000516887 130 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 RNU6-352P-201ENST00000516908 107 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 RPL10P18-201ENST00000519384 309 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 AC012339.2-201ENST00000523996 453 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC6.65□□□□□ -1.34
PHOX2BQ99453 AC091078.2-201ENST00000557145 559 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 TPRX1P1-201ENST00000557620 319 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.65□□□□□ -1.34
PHOX2BQ99453 MIR4701-201ENST00000583094 63 ntBASIC6.65□□□□□ -1.34
PHOX2BQ99453 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.65□□□□□ -1.34
PHOX2BQ99453 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PHOX2BQ99453 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PHOX2BQ99453 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PHOX2BQ99453 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PHOX2BQ99453 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PHOX2BQ99453 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PHOX2BQ99453 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.65□□□□□ -1.35
PHOX2BQ99453 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
PHOX2BQ99453 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PHOX2BQ99453 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.65□□□□□ -1.35
PHOX2BQ99453 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.65□□□□□ -1.35
PHOX2BQ99453 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PHOX2BQ99453 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PHOX2BQ99453 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PHOX2BQ99453 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PHOX2BQ99453 RNU6-1059P-201ENST00000363752 98 ntBASIC6.64□□□□□ -1.35
PHOX2BQ99453 Y_RNA.222-201ENST00000364264 102 ntBASIC6.64□□□□□ -1.35
PHOX2BQ99453 RNU6-701P-201ENST00000384059 107 ntBASIC6.64□□□□□ -1.35
PHOX2BQ99453 SNORA70-201ENST00000384436 135 ntBASIC6.64□□□□□ -1.35
PHOX2BQ99453 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
PHOX2BQ99453 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 RNU6-1156P-201ENST00000410365 100 ntBASIC6.64□□□□□ -1.35
PHOX2BQ99453 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 DAP3P1-201ENST00000441522 278 ntBASIC6.64□□□□□ -1.35
PHOX2BQ99453 GAPDHP33-201ENST00000443168 1013 ntBASIC6.64□□□□□ -1.35
PHOX2BQ99453 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 PSPC1P2-201ENST00000455130 225 ntBASIC6.64□□□□□ -1.35
PHOX2BQ99453 AC091180.1-201ENST00000462104 372 ntBASIC6.64□□□□□ -1.35
PHOX2BQ99453 AC098847.1-201ENST00000473094 348 ntBASIC6.64□□□□□ -1.35
PHOX2BQ99453 RN7SL797P-201ENST00000486314 297 ntBASIC6.64□□□□□ -1.35
PHOX2BQ99453 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.64□□□□□ -1.35
PHOX2BQ99453 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms