Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 DSTNP4-201ENST00000399472 474 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 EIF5P1-201ENST00000400019 1231 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 AL355379.1-201ENST00000405542 640 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 RPL36P19-201ENST00000430744 301 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 ATP5JP1-201ENST00000431631 322 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 HMGB1P45-201ENST00000435986 653 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 AC006994.1-201ENST00000438212 839 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 AC074367.1-201ENST00000438685 1125 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 U3.44-201ENST00000458938 192 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 RN7SL293P-201ENST00000481765 281 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 AP000619.3-201ENST00000535634 1127 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 SNRPGP1-201ENST00000553864 222 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 EIF5A2P1-201ENST00000564027 460 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 AC053481.3-201ENST00000577881 843 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 AC090616.5-202ENST00000582111 297 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 AC019176.2-201ENST00000611579 315 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 SNORA50A-202ENST00000629536 136 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 ZNF542P-204ENST00000482727 1305 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 SAGE4P-201ENST00000442271 3381 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 MTCO1P12-201ENST00000414273 1543 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 RIOK3P1-201ENST00000418778 1528 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 RNU4-35P-201ENST00000362588 141 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 RNA5SP50-201ENST00000363731 107 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 SNORD56.4-201ENST00000363883 71 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 RNU6-650P-201ENST00000365658 111 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 AP000567.1-201ENST00000406413 156 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 MTND2P16-201ENST00000419987 799 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 UBE2V1P1-201ENST00000430836 445 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 RPL21P112-201ENST00000434403 463 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 RPL6P5-201ENST00000445678 828 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 AL590399.6-201ENST00000446396 307 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 CYCSP35-201ENST00000451978 304 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 RBMY2UP-201ENST00000453474 324 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 PHBP14-201ENST00000512887 367 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 RNU6-202P-201ENST00000515998 96 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 AC093331.1-201ENST00000521474 169 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 CCNG2P1-201ENST00000549521 1000 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 AL671309.1-201ENST00000603750 544 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 AC096586.1-201ENST00000610267 561 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 AC012314.7-201ENST00000619693 93 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 AC015967.1-201ENST00000619893 476 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 AL109659.3-201ENST00000624985 950 ntBASIC3.6□□□□□ -1.83
RPRD1AQ96P16 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RPRD1AQ96P16 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC007256.1-201ENST00000392253 2765 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 RNU6-1243P-201ENST00000364028 107 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 ATP5F1P6-201ENST00000402768 767 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 RNU4-27P-201ENST00000410889 139 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AL445183.3-201ENST00000414168 502 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC093578.1-201ENST00000415219 368 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC068533.1-201ENST00000418542 415 ntBASIC3.59□□□□□ -1.83
RPRD1AQ96P16 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms