Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RN7SL643P-201ENST00000471845 291 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 AC087385.1-201ENST00000475062 312 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 RPS14P8-201ENST00000478778 369 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 AC098583.1-201ENST00000480875 255 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 AC108078.2-201ENST00000510750 236 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 SOD1P3-201ENST00000518682 454 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 AC100784.1-201ENST00000522790 310 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 HMGB1P42-201ENST00000532126 553 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 AL591767.3-201ENST00000554632 525 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 AC023827.2-201ENST00000566880 1061 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 RPS29P30-201ENST00000600975 111 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 AC020765.1-201ENST00000604296 328 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 AL136228.1-201ENST00000622221 319 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 AL450226.2-201ENST00000622913 439 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
LRCH3Q96II8 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
LRCH3Q96II8 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.32
LRCH3Q96II8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC6.84□□□□□ -1.32
LRCH3Q96II8 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 AC007938.1-201ENST00000562524 2902 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 RNU1-24P-201ENST00000364285 165 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 MIR141-201ENST00000384975 95 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 MIR550A3-201ENST00000390735 95 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 FABP5P2-201ENST00000439042 408 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 NDUFB4P10-201ENST00000452541 359 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 RPL23AP31-201ENST00000456160 467 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 AC005532.2-201ENST00000467154 373 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 RBBP4P6-201ENST00000508098 202 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 BX510359.5-201ENST00000515651 304 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 RNU6-479P-201ENST00000516348 105 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 RN7SKP98-201ENST00000517070 156 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 AC034114.1-201ENST00000520293 285 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 AL121576.1-201ENST00000556055 276 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 AC090615.1-201ENST00000577519 154 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 MIR4505-201ENST00000582238 73 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 IMMP1LP3-201ENST00000604197 224 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 RPSAP73-201ENST00000614820 330 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 AC000123.2-201ENST00000623124 461 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 AL136313.1-201ENST00000624804 202 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
LRCH3Q96II8 AL391684.1-202ENST00000641293 1636 ntBASIC6.83□□□□□ -1.32
LRCH3Q96II8 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
LRCH3Q96II8 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LRCH3Q96II8 AC008957.3-201ENST00000624112 2242 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LRCH3Q96II8 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LRCH3Q96II8 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
LRCH3Q96II8 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms