Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RNA5SP49-201ENST00000516450 115 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RNA5SP519-201ENST00000516480 119 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 MED28P5-201ENST00000528254 438 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC087883.1-201ENST00000551882 391 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 GTF2IP22-201ENST00000554443 182 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 MIR4330-201ENST00000579077 105 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AL606834.2-201ENST00000602954 668 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC015871.2-201ENST00000603605 948 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC133552.5-201ENST00000604266 540 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC019193.2-201ENST00000610012 634 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AL356266.1-201ENST00000623311 483 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC019226.1-201ENST00000625666 515 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 Y_RNA.88-201ENST00000363029 99 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 RNU6-839P-201ENST00000363347 108 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 RNU1-132P-201ENST00000364300 164 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 RNY3P10-201ENST00000384764 102 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 MIR320B1-201ENST00000390209 79 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AL034374.1-201ENST00000406329 351 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 RNU2-42P-201ENST00000410697 113 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 OR51A3P-201ENST00000413596 924 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 RPS3AP54-201ENST00000435535 734 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 TMX2P1-201ENST00000436507 708 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 RPL23AP89-201ENST00000439324 255 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 DNAJC19P4-201ENST00000440115 345 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC022431.1-201ENST00000450941 438 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 FGF7P6-202ENST00000451282 293 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC002553.2-201ENST00000453217 340 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC116353.2-201ENST00000505332 712 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 RNA5SP360-201ENST00000516555 118 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 IGHV3-32-201ENST00000519182 355 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 ZNF519P3-201ENST00000557158 1032 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 GTF2IP8-201ENST00000560687 584 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 SULT1C2P2-201ENST00000562517 294 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 TPRKBP2-201ENST00000565969 475 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC008638.3-201ENST00000603341 463 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC012360.2-201ENST00000609349 391 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC024941.1-201ENST00000612250 334 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC026368.1-201ENST00000614934 690 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC008785.1-201ENST00000624475 456 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC025048.6-202ENST00000627667 438 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 AC099654.12-201ENST00000639868 649 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 Z99496.1-201ENST00000469424 1477 ntBASIC4.18□□□□□ -1.74
ZNF549Q6P9A3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 OR4G2P-201ENST00000328113 903 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 FGF7P2-201ENST00000332473 296 ntBASIC4.17□□□□□ -1.74
ZNF549Q6P9A3 IGKV7-3-201ENST00000357453 298 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms