Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 NUTF2P3-201ENST00000448540 384 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 RPL36AP33-201ENST00000450395 310 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 MTCO3P2-201ENST00000457365 171 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 RN7SL303P-201ENST00000469773 251 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC010683.1-201ENST00000473673 378 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AP000893.1-201ENST00000474462 794 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC109486.1-201ENST00000486833 374 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 RNU6-150P-201ENST00000516237 95 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC239860.2-201ENST00000525886 270 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC011477.5-201ENST00000586571 259 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC022146.1-201ENST00000595307 847 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 ARF4P1-201ENST00000605447 541 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC090948.1-201ENST00000607464 549 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC012409.3-201ENST00000611343 981 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC092794.1-201ENST00000612734 582 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC015540.1-201ENST00000615828 501 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 U3.53-201ENST00000628922 216 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AL445437.1-201ENST00000623157 3087 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 MTND4P16-201ENST00000466108 1367 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 RNU4-21P-201ENST00000362802 126 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 U3.4-201ENST00000363352 213 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC025750.1-201ENST00000399891 379 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AL121972.1-201ENST00000402023 252 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC073264.1-201ENST00000411508 416 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC092647.1-201ENST00000420654 287 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 MTCO2P34-201ENST00000421994 607 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 MED14P1-201ENST00000430517 648 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 EPS15P1-201ENST00000448836 336 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC079168.2-201ENST00000453977 416 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 RN7SL517P-201ENST00000462240 305 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC090013.1-201ENST00000485147 480 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 RPS4XP15-201ENST00000489210 795 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 KLRA1P-201ENST00000503499 986 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 SNORA31.9-201ENST00000516429 84 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 RNU6-709P-201ENST00000517257 104 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 OR4A12P-201ENST00000530847 918 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC008127.2-201ENST00000549925 1075 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AL133457.1-201ENST00000564251 987 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC093227.2-201ENST00000589357 285 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 BNIP3P22-201ENST00000593399 556 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC113194.1-201ENST00000606037 500 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC092354.1-201ENST00000606057 376 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC239868.4-201ENST00000608318 671 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC068944.2-201ENST00000610373 403 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 ZYXP1-201ENST00000617638 118 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC009878.1-201ENST00000621819 340 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC067931.1-201ENST00000624190 671 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AL359740.1-201ENST00000624340 592 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AL672167.1-205ENST00000641112 3080 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 IQCB2P-201ENST00000401788 1633 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 PHKBP1-201ENST00000450951 1951 ntBASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SLC44A4Q53GD3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms