Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL008987.1-201ENST00000415528 237 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 NANOGP6-201ENST00000429190 847 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.37□□□□□ -1.87
HCFC1P51610 ATG12P2-201ENST00000456830 416 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 RPL21P10-201ENST00000463521 490 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.37□□□□□ -1.87
HCFC1P51610 RPS3AP43-201ENST00000479743 781 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.37□□□□□ -1.87
HCFC1P51610 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.37□□□□□ -1.87
HCFC1P51610 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.37□□□□□ -1.87
HCFC1P51610 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HCFC1P51610 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.37□□□□□ -1.87
HCFC1P51610 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.37□□□□□ -1.87
HCFC1P51610 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HCFC1P51610 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.37□□□□□ -1.87
HCFC1P51610 VN1R88P-201ENST00000596787 292 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HCFC1P51610 Z99497.2-201ENST00000603634 310 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.37□□□□□ -1.87
HCFC1P51610 AC013468.1-201ENST00000608680 598 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 VIS1.1-201ENST00000610517 203 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 AC105227.2-201ENST00000615075 605 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 AC121761.2-201ENST00000617300 689 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 AC124312.6-202ENST00000623624 418 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 AC079416.3-201ENST00000624479 549 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 ATE1-AS1-202ENST00000636460 506 ntBASIC3.37□□□□□ -1.87
HCFC1P51610 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.37□□□□□ -1.87
HCFC1P51610 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HCFC1P51610 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HCFC1P51610 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HCFC1P51610 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HCFC1P51610 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HCFC1P51610 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.36□□□□□ -1.87
HCFC1P51610 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HCFC1P51610 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HCFC1P51610 OR52E6-202ENST00000379946 954 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 MIR483-201ENST00000385070 76 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HCFC1P51610 TAF9BP1-201ENST00000396646 746 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 PAICSP7-201ENST00000419829 962 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.36□□□□□ -1.87
HCFC1P51610 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HCFC1P51610 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.36□□□□□ -1.87
HCFC1P51610 RNU7-125P-201ENST00000458760 62 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 PLGLA-201ENST00000465668 449 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.36□□□□□ -1.87
HCFC1P51610 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 OR5H4P-201ENST00000510851 923 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 AC108471.1-201ENST00000513977 287 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 HNRNPKP5-201ENST00000515300 253 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 AC087369.1-201ENST00000520775 996 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
HCFC1P51610 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 AC010198.2-201ENST00000550612 259 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.36□□□□□ -1.87
HCFC1P51610 AC004223.2-201ENST00000590309 544 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 AP001542.2-201ENST00000593141 364 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 AP003973.1-201ENST00000604639 691 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 AL137849.1-201ENST00000604767 169 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 AL355816.1-201ENST00000607951 118 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.36□□□□□ -1.87
HCFC1P51610 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HCFC1P51610 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 AC004943.3-201ENST00000624116 600 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HCFC1P51610 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HCFC1P51610 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HCFC1P51610 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.36□□□□□ -1.87
HCFC1P51610 PRO1804-201ENST00000623780 2050 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 AC092079.1-201ENST00000558620 1985 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
HCFC1P51610 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HCFC1P51610 SNORA40.2-201ENST00000390847 128 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.36□□□□□ -1.87
HCFC1P51610 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 AC006960.1-201ENST00000419980 153 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 C1DP1-201ENST00000426049 402 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HCFC1P51610 YWHAZP7-201ENST00000436906 631 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 RPL7P28-201ENST00000437739 740 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 CBX1P4-201ENST00000439415 457 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 HMGB1P37-201ENST00000439613 609 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC1P51610 AL109741.2-201ENST00000455561 343 ntBASIC3.36□□□□□ -1.87
HCFC1P51610 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.36□□□□□ -1.87
HCFC1P51610 AC126121.1-201ENST00000482313 553 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms