Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXD11P31277 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXD11P31277 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC8.19□□□□□ -1.1
HOXD11P31277 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXD11P31277 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXD11P31277 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.19□□□□□ -1.1
HOXD11P31277 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXD11P31277 MAPK10-333ENST00000641607 2481 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
HOXD11P31277 SNORA48.5-201ENST00000391143 135 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 AC119751.6-201ENST00000416712 186 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 AC012306.1-201ENST00000423267 114 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 AL500522.2-201ENST00000448562 343 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 RN7SL790P-201ENST00000474043 298 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 RN7SL549P-201ENST00000478997 282 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 AC117454.1-201ENST00000491120 168 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 AC006070.1-201ENST00000508151 193 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 SNORA18.4-201ENST00000516440 124 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 SCARNA21.2-201ENST00000516600 166 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 AC091144.2-201ENST00000521717 433 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC8.19□□□□□ -1.1
HOXD11P31277 AL356575.1-201ENST00000603008 283 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 AC113554.1-201ENST00000606284 490 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 AL359198.2-201ENST00000611836 194 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXD11P31277 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
HOXD11P31277 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXD11P31277 AC116456.2-201ENST00000623018 2209 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 UBE3B-207ENST00000537063 3600 ntTSL 3 BASIC8.19□□□□□ -1.1
HOXD11P31277 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
HOXD11P31277 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXD11P31277 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.19□□□□□ -1.1
HOXD11P31277 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXD11P31277 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC8.19□□□□□ -1.1
HOXD11P31277 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXD11P31277 MAOA-201ENST00000338702 4015 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXD11P31277 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC8.19□□□□□ -1.1
HOXD11P31277 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
HOXD11P31277 AL590004.4-201ENST00000566733 7060 ntBASIC8.19□□□□□ -1.1
HOXD11P31277 CCR3-201ENST00000357422 2000 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
HOXD11P31277 NYAP2-201ENST00000272907 4590 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXD11P31277 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC8.18□□□□□ -1.1
HOXD11P31277 BCL9P1-201ENST00000506012 2561 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC8.18□□□□□ -1.1
HOXD11P31277 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 LINC02072-201ENST00000441895 2645 ntTSL 2 BASIC8.18□□□□□ -1.1
HOXD11P31277 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 ADCY10P1-202ENST00000457653 3785 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 ZNF610-203ENST00000403906 2191 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.18□□□□□ -1.1
HOXD11P31277 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC8.18□□□□□ -1.1
HOXD11P31277 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
HOXD11P31277 ZNF583-202ENST00000333201 4916 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
HOXD11P31277 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 MAPK10-260ENST00000641047 2546 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 Y_RNA.52-201ENST00000362760 96 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 Y_RNA.243-201ENST00000364481 109 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 RNU6-1141P-201ENST00000364520 107 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 RN7SKP50-201ENST00000364694 315 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 RNU6-787P-201ENST00000384032 107 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
HOXD11P31277 HMGB1P37-201ENST00000439613 609 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC8.18□□□□□ -1.1
HOXD11P31277 AC010618.1-201ENST00000469924 477 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 RPL31P41-201ENST00000477967 372 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 RNA5SP154-201ENST00000516193 111 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC8.18□□□□□ -1.1
HOXD11P31277 AC090287.1-201ENST00000578374 291 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC8.18□□□□□ -1.1
HOXD11P31277 MIR5008-201ENST00000584300 94 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC8.18□□□□□ -1.1
HOXD11P31277 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC8.18□□□□□ -1.1
HOXD11P31277 AC025279.3-201ENST00000622398 104 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
HOXD11P31277 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
HOXD11P31277 ASNSP1-201ENST00000518311 1939 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 KCNE1-201ENST00000337385 3347 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
HOXD11P31277 UGT1A1-202ENST00000360418 3389 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 AC105749.1-201ENST00000631338 2008 ntBASIC8.18□□□□□ -1.1
HOXD11P31277 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
HOXD11P31277 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC8.18□□□□□ -1.1
HOXD11P31277 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC8.18□□□□□ -1.1
HOXD11P31277 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 UTRN-203ENST00000367526 3220 ntTSL 5 BASIC8.18□□□□□ -1.1
HOXD11P31277 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXD11P31277 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms