Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHC1P29353 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHC1P29353 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.55□□□□□ -1.84
SHC1P29353 AC095050.2-201ENST00000510748 1458 ntBASIC3.54□□□□□ -1.84
SHC1P29353 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SHC1P29353 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHC1P29353 AL139811.1-201ENST00000424779 2299 ntBASIC3.54□□□□□ -1.84
SHC1P29353 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHC1P29353 FAM133CP-201ENST00000332869 704 ntBASIC3.54□□□□□ -1.84
SHC1P29353 MIR423-201ENST00000362201 94 ntBASIC3.54□□□□□ -1.84
SHC1P29353 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.54□□□□□ -1.84
SHC1P29353 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHC1P29353 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHC1P29353 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.54□□□□□ -1.84
SHC1P29353 RPL7AP73-201ENST00000413490 353 ntBASIC3.54□□□□□ -1.84
SHC1P29353 LINC01881-201ENST00000416103 412 ntBASIC3.54□□□□□ -1.84
SHC1P29353 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.54□□□□□ -1.84
SHC1P29353 Z97055.1-201ENST00000419730 712 ntBASIC3.54□□□□□ -1.84
SHC1P29353 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.54□□□□□ -1.84
SHC1P29353 RPL30P3-201ENST00000424262 333 ntBASIC3.54□□□□□ -1.84
SHC1P29353 MTND1P32-201ENST00000433043 938 ntBASIC3.54□□□□□ -1.84
SHC1P29353 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHC1P29353 AC234064.1-201ENST00000436312 247 ntBASIC3.54□□□□□ -1.84
SHC1P29353 RPS29P7-201ENST00000439662 171 ntBASIC3.54□□□□□ -1.84
SHC1P29353 AC091959.2-201ENST00000477363 321 ntBASIC3.54□□□□□ -1.84
SHC1P29353 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.54□□□□□ -1.84
SHC1P29353 RN7SL271P-201ENST00000487601 295 ntBASIC3.54□□□□□ -1.84
SHC1P29353 RPL7P24-201ENST00000493052 752 ntBASIC3.54□□□□□ -1.84
SHC1P29353 AC106872.2-201ENST00000494303 480 ntBASIC3.54□□□□□ -1.84
SHC1P29353 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.54□□□□□ -1.84
SHC1P29353 AC091435.1-201ENST00000505442 584 ntBASIC3.54□□□□□ -1.84
SHC1P29353 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.54□□□□□ -1.84
SHC1P29353 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.54□□□□□ -1.84
SHC1P29353 AC010285.3-201ENST00000511668 676 ntBASIC3.54□□□□□ -1.84
SHC1P29353 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.54□□□□□ -1.84
SHC1P29353 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.54□□□□□ -1.84
SHC1P29353 AP003461.1-201ENST00000528866 78 ntBASIC3.54□□□□□ -1.84
SHC1P29353 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.54□□□□□ -1.84
SHC1P29353 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.54□□□□□ -1.84
SHC1P29353 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.54□□□□□ -1.84
SHC1P29353 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.54□□□□□ -1.84
SHC1P29353 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.54□□□□□ -1.84
SHC1P29353 AC121247.2-201ENST00000604776 136 ntBASIC3.54□□□□□ -1.84
SHC1P29353 AC110741.2-201ENST00000605278 268 ntBASIC3.54□□□□□ -1.84
SHC1P29353 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHC1P29353 CR392039.4-201ENST00000624968 501 ntBASIC3.54□□□□□ -1.84
SHC1P29353 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.54□□□□□ -1.84
SHC1P29353 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.54□□□□□ -1.84
SHC1P29353 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHC1P29353 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHC1P29353 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.54□□□□□ -1.84
SHC1P29353 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHC1P29353 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHC1P29353 AC138393.1-206ENST00000540997 1886 ntBASIC3.54□□□□□ -1.84
SHC1P29353 AP002001.2-201ENST00000529025 1469 ntBASIC3.54□□□□□ -1.84
SHC1P29353 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHC1P29353 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SHC1P29353 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHC1P29353 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHC1P29353 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SHC1P29353 ATP5F1P3-201ENST00000397213 657 ntBASIC3.53□□□□□ -1.84
SHC1P29353 RNU6-575P-201ENST00000411326 105 ntBASIC3.53□□□□□ -1.84
SHC1P29353 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.53□□□□□ -1.84
SHC1P29353 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.53□□□□□ -1.84
SHC1P29353 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.53□□□□□ -1.84
SHC1P29353 AC005345.1-201ENST00000431868 217 ntBASIC3.53□□□□□ -1.84
SHC1P29353 RPS6P12-201ENST00000432491 726 ntBASIC3.53□□□□□ -1.84
SHC1P29353 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.53□□□□□ -1.84
SHC1P29353 HMGB1P37-201ENST00000439613 609 ntBASIC3.53□□□□□ -1.84
SHC1P29353 UBE2D3P4-201ENST00000441973 436 ntBASIC3.53□□□□□ -1.84
SHC1P29353 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.53□□□□□ -1.84
SHC1P29353 AL929288.2-201ENST00000446368 407 ntBASIC3.53□□□□□ -1.84
SHC1P29353 AC007327.1-201ENST00000447461 264 ntBASIC3.53□□□□□ -1.84
SHC1P29353 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.53□□□□□ -1.84
SHC1P29353 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.53□□□□□ -1.84
SHC1P29353 DNAJC19P8-201ENST00000452887 259 ntBASIC3.53□□□□□ -1.84
SHC1P29353 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHC1P29353 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.53□□□□□ -1.84
SHC1P29353 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.53□□□□□ -1.84
SHC1P29353 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SHC1P29353 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.53□□□□□ -1.84
SHC1P29353 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.53□□□□□ -1.84
SHC1P29353 AC004069.2-201ENST00000505438 1114 ntBASIC3.53□□□□□ -1.84
SHC1P29353 AC010460.1-201ENST00000507087 466 ntBASIC3.53□□□□□ -1.84
SHC1P29353 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.53□□□□□ -1.84
SHC1P29353 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.53□□□□□ -1.84
SHC1P29353 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.53□□□□□ -1.84
SHC1P29353 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.53□□□□□ -1.84
SHC1P29353 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHC1P29353 DEFB109D-201ENST00000529497 240 ntBASIC3.53□□□□□ -1.84
SHC1P29353 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHC1P29353 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHC1P29353 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.53□□□□□ -1.84
SHC1P29353 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.53□□□□□ -1.84
SHC1P29353 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.53□□□□□ -1.84
SHC1P29353 AC044913.1-201ENST00000557200 430 ntBASIC3.53□□□□□ -1.84
SHC1P29353 AC090888.1-201ENST00000561335 1141 ntBASIC3.53□□□□□ -1.84
SHC1P29353 MTCYBP33-201ENST00000575007 1130 ntBASIC3.53□□□□□ -1.84
SHC1P29353 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.53□□□□□ -1.84
SHC1P29353 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms