Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.07□□□□□ -1.92
USF1P22415 AC006116.10-201ENST00000591836 581 ntBASIC3.07□□□□□ -1.92
USF1P22415 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.07□□□□□ -1.92
USF1P22415 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.07□□□□□ -1.92
USF1P22415 AL031985.2-201ENST00000600955 480 ntBASIC3.07□□□□□ -1.92
USF1P22415 HMGN2P28-201ENST00000606102 262 ntBASIC3.07□□□□□ -1.92
USF1P22415 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.07□□□□□ -1.92
USF1P22415 AL163051.2-201ENST00000618976 735 ntBASIC3.07□□□□□ -1.92
USF1P22415 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
USF1P22415 AC092628.2-201ENST00000622492 339 ntBASIC3.07□□□□□ -1.92
USF1P22415 AP000553.6-201ENST00000641242 118 ntBASIC3.07□□□□□ -1.92
USF1P22415 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
USF1P22415 ELL2P4-201ENST00000446870 1376 ntBASIC3.07□□□□□ -1.92
USF1P22415 AC138915.3-201ENST00000562908 1389 ntBASIC3.07□□□□□ -1.92
USF1P22415 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.07□□□□□ -1.92
USF1P22415 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
USF1P22415 CR381670.1-201ENST00000624291 1693 ntBASIC3.07□□□□□ -1.92
USF1P22415 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.07□□□□□ -1.92
USF1P22415 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
USF1P22415 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.07□□□□□ -1.92
USF1P22415 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.06□□□□□ -1.92
USF1P22415 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
USF1P22415 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USF1P22415 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USF1P22415 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.06□□□□□ -1.92
USF1P22415 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.06□□□□□ -1.92
USF1P22415 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
USF1P22415 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
USF1P22415 SNORD9-201ENST00000362566 104 ntBASIC3.06□□□□□ -1.92
USF1P22415 RNA5SP267-201ENST00000364893 126 ntBASIC3.06□□□□□ -1.92
USF1P22415 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USF1P22415 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.06□□□□□ -1.92
USF1P22415 HSPE1P26-201ENST00000405341 275 ntBASIC3.06□□□□□ -1.92
USF1P22415 RPL31P2-201ENST00000413849 377 ntBASIC3.06□□□□□ -1.92
USF1P22415 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.06□□□□□ -1.92
USF1P22415 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.06□□□□□ -1.92
USF1P22415 MTCYBP24-201ENST00000420387 1106 ntBASIC3.06□□□□□ -1.92
USF1P22415 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.06□□□□□ -1.92
USF1P22415 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.06□□□□□ -1.92
USF1P22415 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.06□□□□□ -1.92
USF1P22415 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.06□□□□□ -1.92
USF1P22415 AC097713.2-201ENST00000430199 356 ntBASIC3.06□□□□□ -1.92
USF1P22415 HMGB1P45-201ENST00000435986 653 ntBASIC3.06□□□□□ -1.92
USF1P22415 AC006994.1-201ENST00000438212 839 ntBASIC3.06□□□□□ -1.92
USF1P22415 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
USF1P22415 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.06□□□□□ -1.92
USF1P22415 TXNP1-201ENST00000441872 371 ntBASIC3.06□□□□□ -1.92
USF1P22415 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.06□□□□□ -1.92
USF1P22415 AC010655.1-201ENST00000449336 292 ntBASIC3.06□□□□□ -1.92
USF1P22415 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.06□□□□□ -1.92
USF1P22415 OR52A4P-202ENST00000481634 799 ntBASIC3.06□□□□□ -1.92
USF1P22415 RPL31P13-201ENST00000484151 370 ntBASIC3.06□□□□□ -1.92
USF1P22415 NCOR1P1-202ENST00000486162 291 ntBASIC3.06□□□□□ -1.92
USF1P22415 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USF1P22415 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.06□□□□□ -1.92
USF1P22415 SETP12-201ENST00000514068 805 ntBASIC3.06□□□□□ -1.92
USF1P22415 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.06□□□□□ -1.92
USF1P22415 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.06□□□□□ -1.92
USF1P22415 RNU6-488P-201ENST00000515918 99 ntBASIC3.06□□□□□ -1.92
USF1P22415 SNORA76.2-201ENST00000517095 137 ntBASIC3.06□□□□□ -1.92
USF1P22415 AC093331.1-201ENST00000521474 169 ntBASIC3.06□□□□□ -1.92
USF1P22415 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.06□□□□□ -1.92
USF1P22415 OR7E13P-201ENST00000526052 910 ntBASIC3.06□□□□□ -1.92
USF1P22415 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.06□□□□□ -1.92
USF1P22415 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USF1P22415 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.06□□□□□ -1.92
USF1P22415 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.06□□□□□ -1.92
USF1P22415 NCAPGP2-201ENST00000557911 754 ntBASIC3.06□□□□□ -1.92
USF1P22415 MIR3186-201ENST00000577404 85 ntBASIC3.06□□□□□ -1.92
USF1P22415 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.06□□□□□ -1.92
USF1P22415 AL009028.1-201ENST00000604895 802 ntBASIC3.06□□□□□ -1.92
USF1P22415 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.06□□□□□ -1.92
USF1P22415 AC092326.2-201ENST00000624772 1561 ntBASIC3.06□□□□□ -1.92
USF1P22415 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.06□□□□□ -1.92
USF1P22415 AL049781.1-201ENST00000623195 3585 ntBASIC3.06□□□□□ -1.92
USF1P22415 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USF1P22415 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USF1P22415 AL589826.1-201ENST00000340697 249 ntBASIC3.05□□□□□ -1.92
USF1P22415 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
USF1P22415 ATP5F1P6-201ENST00000402768 767 ntBASIC3.05□□□□□ -1.92
USF1P22415 ATF1P1-201ENST00000406040 927 ntBASIC3.05□□□□□ -1.92
USF1P22415 AC073264.1-201ENST00000411508 416 ntBASIC3.05□□□□□ -1.92
USF1P22415 RPL30P2-201ENST00000414021 291 ntBASIC3.05□□□□□ -1.92
USF1P22415 AIMP1P1-201ENST00000418670 937 ntBASIC3.05□□□□□ -1.92
USF1P22415 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.05□□□□□ -1.92
USF1P22415 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.05□□□□□ -1.92
USF1P22415 RNFT1P2-201ENST00000443064 757 ntBASIC3.05□□□□□ -1.92
USF1P22415 HMGB3P8-201ENST00000449709 577 ntBASIC3.05□□□□□ -1.92
USF1P22415 RPL21P10-201ENST00000463521 490 ntBASIC3.05□□□□□ -1.92
USF1P22415 AC087879.1-201ENST00000474343 374 ntBASIC3.05□□□□□ -1.92
USF1P22415 AC026784.1-201ENST00000507986 352 ntBASIC3.05□□□□□ -1.92
USF1P22415 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.05□□□□□ -1.92
USF1P22415 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.05□□□□□ -1.92
USF1P22415 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.05□□□□□ -1.92
USF1P22415 AC011611.1-201ENST00000552179 197 ntBASIC3.05□□□□□ -1.92
USF1P22415 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.05□□□□□ -1.92
USF1P22415 RPL21P12-201ENST00000559810 515 ntBASIC3.05□□□□□ -1.92
USF1P22415 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.05□□□□□ -1.92
USF1P22415 EIF5A2P1-201ENST00000564027 460 ntBASIC3.05□□□□□ -1.92
USF1P22415 AC095057.3-201ENST00000567102 1157 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms