Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LDLRP01130 RNA5SP502-201ENST00000362694 119 ntBASIC4.06□□□□□ -1.76
LDLRP01130 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.06□□□□□ -1.76
LDLRP01130 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.06□□□□□ -1.76
LDLRP01130 Y_RNA.465-201ENST00000384293 102 ntBASIC4.06□□□□□ -1.76
LDLRP01130 RNU6-1300P-201ENST00000391046 108 ntBASIC4.06□□□□□ -1.76
LDLRP01130 AL139098.1-201ENST00000407291 389 ntBASIC4.06□□□□□ -1.76
LDLRP01130 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.06□□□□□ -1.76
LDLRP01130 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.06□□□□□ -1.76
LDLRP01130 AL136133.1-201ENST00000413694 376 ntBASIC4.06□□□□□ -1.76
LDLRP01130 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.06□□□□□ -1.76
LDLRP01130 MRPS36P1-201ENST00000421291 307 ntBASIC4.06□□□□□ -1.76
LDLRP01130 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.06□□□□□ -1.76
LDLRP01130 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.06□□□□□ -1.76
LDLRP01130 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.06□□□□□ -1.76
LDLRP01130 MTND4P6-201ENST00000438297 472 ntBASIC4.06□□□□□ -1.76
LDLRP01130 AC105402.2-201ENST00000438503 358 ntBASIC4.06□□□□□ -1.76
LDLRP01130 USP9YP22-201ENST00000438971 294 ntBASIC4.06□□□□□ -1.76
LDLRP01130 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.06□□□□□ -1.76
LDLRP01130 HMGB3P22-202ENST00000451823 572 ntBASIC4.06□□□□□ -1.76
LDLRP01130 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.06□□□□□ -1.76
LDLRP01130 NF1P3-201ENST00000457709 450 ntBASIC4.06□□□□□ -1.76
LDLRP01130 RPL7L1P8-201ENST00000469911 741 ntBASIC4.06□□□□□ -1.76
LDLRP01130 AC041039.1-201ENST00000485656 536 ntBASIC4.06□□□□□ -1.76
LDLRP01130 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.06□□□□□ -1.76
LDLRP01130 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.06□□□□□ -1.76
LDLRP01130 RNU6-488P-201ENST00000515918 99 ntBASIC4.06□□□□□ -1.76
LDLRP01130 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.06□□□□□ -1.76
LDLRP01130 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.06□□□□□ -1.76
LDLRP01130 AC087808.1-201ENST00000520501 361 ntBASIC4.06□□□□□ -1.76
LDLRP01130 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.06□□□□□ -1.76
LDLRP01130 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.06□□□□□ -1.76
LDLRP01130 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.06□□□□□ -1.76
LDLRP01130 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.06□□□□□ -1.76
LDLRP01130 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.06□□□□□ -1.76
LDLRP01130 GTF2IP8-201ENST00000560687 584 ntBASIC4.06□□□□□ -1.76
LDLRP01130 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.06□□□□□ -1.76
LDLRP01130 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.06□□□□□ -1.76
LDLRP01130 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.06□□□□□ -1.76
LDLRP01130 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.06□□□□□ -1.76
LDLRP01130 AC069545.1-201ENST00000605671 358 ntBASIC4.06□□□□□ -1.76
LDLRP01130 AL354760.1-201ENST00000608357 643 ntBASIC4.06□□□□□ -1.76
LDLRP01130 AC107075.1-201ENST00000613695 314 ntBASIC4.06□□□□□ -1.76
LDLRP01130 AC022306.2-201ENST00000617563 647 ntBASIC4.06□□□□□ -1.76
LDLRP01130 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LDLRP01130 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.06□□□□□ -1.76
LDLRP01130 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LDLRP01130 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.06□□□□□ -1.76
LDLRP01130 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
LDLRP01130 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LDLRP01130 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.06□□□□□ -1.76
LDLRP01130 MTCO1P14-201ENST00000441695 1559 ntBASIC4.06□□□□□ -1.76
LDLRP01130 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
LDLRP01130 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LDLRP01130 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.05□□□□□ -1.76
LDLRP01130 AC093536.2-201ENST00000565257 1406 ntBASIC4.05□□□□□ -1.76
LDLRP01130 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LDLRP01130 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LDLRP01130 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.05□□□□□ -1.76
LDLRP01130 MIR383-201ENST00000362257 73 ntBASIC4.05□□□□□ -1.76
LDLRP01130 RNU6-1066P-201ENST00000363573 105 ntBASIC4.05□□□□□ -1.76
LDLRP01130 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.05□□□□□ -1.76
LDLRP01130 RNU6-1293P-201ENST00000384077 107 ntBASIC4.05□□□□□ -1.76
LDLRP01130 ZNF603P-201ENST00000405613 487 ntBASIC4.05□□□□□ -1.76
LDLRP01130 RNU2-42P-201ENST00000410697 113 ntBASIC4.05□□□□□ -1.76
LDLRP01130 MTND4P22-201ENST00000413116 1169 ntBASIC4.05□□□□□ -1.76
LDLRP01130 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.05□□□□□ -1.76
LDLRP01130 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.05□□□□□ -1.76
LDLRP01130 RPS12P23-201ENST00000419579 400 ntBASIC4.05□□□□□ -1.76
LDLRP01130 RPL23AP38-201ENST00000423801 469 ntBASIC4.05□□□□□ -1.76
LDLRP01130 COX7BP2-201ENST00000437976 242 ntBASIC4.05□□□□□ -1.76
LDLRP01130 MTCO3P16-201ENST00000454456 754 ntBASIC4.05□□□□□ -1.76
LDLRP01130 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.05□□□□□ -1.76
LDLRP01130 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.05□□□□□ -1.76
LDLRP01130 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.05□□□□□ -1.76
LDLRP01130 FABP5P12-201ENST00000515543 389 ntBASIC4.05□□□□□ -1.76
LDLRP01130 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.05□□□□□ -1.76
LDLRP01130 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.05□□□□□ -1.76
LDLRP01130 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LDLRP01130 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LDLRP01130 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.05□□□□□ -1.76
LDLRP01130 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.05□□□□□ -1.76
LDLRP01130 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.05□□□□□ -1.76
LDLRP01130 AC022662.1-201ENST00000580252 331 ntBASIC4.05□□□□□ -1.76
LDLRP01130 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.05□□□□□ -1.76
LDLRP01130 AP003392.5-201ENST00000607857 415 ntBASIC4.05□□□□□ -1.76
LDLRP01130 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.05□□□□□ -1.76
LDLRP01130 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
LDLRP01130 AC068792.1-201ENST00000621354 417 ntBASIC4.05□□□□□ -1.76
LDLRP01130 RNU6-156P-201ENST00000621869 107 ntBASIC4.05□□□□□ -1.76
LDLRP01130 MIR7702-201ENST00000621931 59 ntBASIC4.05□□□□□ -1.76
LDLRP01130 AP000676.3-201ENST00000623299 569 ntBASIC4.05□□□□□ -1.76
LDLRP01130 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.05□□□□□ -1.76
LDLRP01130 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
LDLRP01130 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LDLRP01130 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LDLRP01130 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
LDLRP01130 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LDLRP01130 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.04□□□□□ -1.76
LDLRP01130 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms